Re: [ccp4bb] Phenix refine has a problem with the added H, plz help

2011-04-26 Thread Pavel Afonine
Dear Mohd, FYI: there is specific mailing list for PHENIX specific questions ( http://phenix-online.org/). Pavel. On Tue, Apr 26, 2011 at 10:56 AM, Salameh, Mohd A., Ph.D. < salameh.m...@mayo.edu> wrote: > Dear All, > > I normally refine my structure without the hydrogens until the final stage

[ccp4bb] Phenix refine has a problem with the added H, plz help

2011-04-26 Thread Salameh, Mohd A., Ph.D.
Dear All, I normally refine my structure without the hydrogens until the final stages. But today I'm facing a real trouble with phenix.refine!! It seems phenix.refine does not recognize the hydrogen atoms and writes out this message: "Fatal problems interpreting PDB file: number of atoms with unkno