Re: [ccp4bb] PHENIX: sequence files input problem

2012-06-13 Thread mattvetting
Matthew Vetting Enzyme Function Initiative Structural Biology Albert Einstein College of Medicine - Reply message - From: "Pavel Afonine" To: Subject: [ccp4bb] PHENIX: sequence files input problem Date: Wed, Jun 13, 2012 4:51 pm Hi Qixu Cai, first off -- as a reminder, there

Re: [ccp4bb] PHENIX: sequence files input problem

2012-06-13 Thread Pavel Afonine
Hi Qixu Cai, first off -- as a reminder, there is Phenix mailing list to post Phenix-related questions: http://www.phenix-online.org/ Your first question: yes, give it one sequence file containing all. Your second question: see here http://phenix-online.org/documentation/autobuild_gui.htm Pavel

[ccp4bb] PHENIX: sequence files input problem

2012-06-13 Thread Qixu Cai
Dear all, Sorry for the non-CCP4 question. My crystal is a complex of two proteins. I use Se-Met SAD method to solve the structure, and only one of the proteins is Se-Met protein. When I use phenix.autobuild to auto-build the model, how do I input the sequences? in a file or two files? And