Re: [ccp4bb] PDB secondary structure assignments

2013-07-04 Thread MARTYN SYMMONS
yn Martyn Symmons Cambridge UK From: Mark J van Raaij To: CCP4BB@JISCMAIL.AC.UK Sent: Wednesday, 3 July 2013, 16:00 Subject: Re: [ccp4bb] PDB secondary structure assignments you are probably right, but the depositor can override the automatic secondar

Re: [ccp4bb] PDB secondary structure assignments

2013-07-03 Thread Mark J van Raaij
make the > DSSP databank). > > Cheers, > Robbie > > > >> -Original Message- >> From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of >> Pavšic, Miha >> Sent: Wednesday, July 03, 2013 16:01 >> To: CCP4BB@JISCMAIL.AC.UK

Re: [ccp4bb] PDB secondary structure assignments

2013-07-03 Thread Robbie Joosten
ha > Sent: Wednesday, July 03, 2013 16:01 > To: CCP4BB@JISCMAIL.AC.UK > Subject: [ccp4bb] PDB secondary structure assignments > > Dear CCP4BB members, > > what is the usual practice regarding secondary structure assignments when > preparing publication figures of protein struct

[ccp4bb] PDB secondary structure assignments

2013-07-03 Thread Pavšič , Miha
Dear CCP4BB members, what is the usual practice regarding secondary structure assignments when preparing publication figures of protein structures and topology diagrams from deposited PDB files? The deposited PDB files already contain such assignments in the header section (using PROMOTIF?). Sh