Re: [ccp4bb] MS for verification of protein constructs

2007-09-05 Thread Artem Evdokimov
867-872 _ From: CCP4 bulletin board [mailto:[EMAIL PROTECTED] On Behalf Of Patrick Loll Sent: Wednesday, September 05, 2007 12:42 PM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] MS for verification of protein constructs I wonder if anyone would care to share experiences/ideas/biases

Re: [ccp4bb] MS for verification of protein constructs

2007-09-05 Thread James Whisstock
Hiya For verification purposes we almost always N-terminal sequence (we are fortunate in that we have such a facility on site so that the samples can be turned round fast) - old technology but good and solid! We then usually combine these data with a Mass Spectra (MALDI-ToF-Tof - on site - is

Re: [ccp4bb] MS for verification of protein constructs

2007-09-05 Thread Anastassis Perrakis
... all these are correct indeed - but ESI-TOF is also a nice solution, especially coupled to an LC system. My understanding was that MALDI-TOF is better for smaller fragments, accuracy can be about 10 Dalton ... for more info there is a useful short review of the use of ms techniques for s

Re: [ccp4bb] MS for verification of protein constructs

2007-09-05 Thread Joel Guenther
If you have a very pure protein sample, you'll want to use an ESI-ion trap for analyzing proteins of that size. It should be possible to get an exact mass (i.e. within a single Da). It's possible, but very rare, to get exact masses of proteins up to 100 kDa using ESI-ion trap instruments. If you

Re: [ccp4bb] MS for verification of protein constructs

2007-09-05 Thread Jacob Keller
I second Dr. Loll's question, and would like to be CC'd in whatever MS tips, including service-providers, are sent. I have been having a bit of a debacle with a certain MS service provider. Jacob Keller ==Original message text=== On Wed, 05 Sep 2007 11:41:52 am CDT Patri

[ccp4bb] MS for verification of protein constructs

2007-09-05 Thread Patrick Loll
I wonder if anyone would care to share experiences/ideas/biases that relate to the use of mass spectrometry to verify the identity of protein constructs used for crystallization. Our experience with different MS facilities has been checquered. Specifically: What's the current thinking on