Re: [ccp4bb] MAD wavelength

2009-07-17 Thread James Holton
Use the scan. And yes, don't fry your crystal doing it. The best way to do this is put the fluorescence detector as close to the sample as you can and then optimize the count rate by attenuating the beam. However, some beamlines are set up to hit your crystal with full beam and then back off t

Re: [ccp4bb] MAD wavelength

2009-07-16 Thread Sanishvili, Ruslan
12:16 PM To: CCP4BB@JISCMAIL.AC.UK Subject: [ccp4bb] MAD wavelength Dear All: Next week we are going to try some seleno-Met labeled crystals. We checked the literature to try to find out the peak wavelength that has been used for SAD or MAD data collection. But they are slightly dif

Re: [ccp4bb] MAD wavelength

2009-07-16 Thread Jürgen Bosch
On a different note,it seems as if SeMet is not a regular experiment in your lab. So I would recommend not to burn your crystals and rather sacrifice the resolution versus loosing your SeMet anomalous signal after couple of degrees into the data collection. It would also be wise to run Mosf

Re: [ccp4bb] MAD wavelength

2009-07-16 Thread Ethan Merritt
On Thursday 16 July 2009 10:15:51 Jerry McCully wrote: > > Dear All: > > Next week we are going to try some seleno-Met labeled crystals. > > We checked the literature to try to find out the peak wavelength that > has been used for SAD or MAD data collection. But they are slightly diff

Re: [ccp4bb] MAD wavelength

2009-07-16 Thread artem
I second Phil's opinion - it is better to scan and be sure - as long as the scan results are not hideously abnormal. If you cannot scan for whatever reason but are sure that the X-ray optical system is properly calibrated - then use Phil's numbers below :) Artem > Always take the scan results ahe

Re: [ccp4bb] MAD wavelength

2009-07-16 Thread Engin Ozkan
Just checking my oxidized Se-Met experiments, I have 12658 to 12661 eV for my peak energies, and 3 eV lower for the inflection. As others have said, do the fluorescence scan. Use your experimentally determined values. Engin On 7/16/09 11:54 AM, Phil Jeffrey wrote: Always take the scan results

Re: [ccp4bb] MAD wavelength

2009-07-16 Thread Phil Jeffrey
Always take the scan results ahead of the typical values unless they are obviously wrong. Only use the "predicted" values if the scan is broken or too weak (e.g. very small crystals) and in that case I'd be tempted to add 10-20 eV to the "typical" peak wavelength to make sure you weren't actua

Re: [ccp4bb] MAD wavelength

2009-07-16 Thread Jacob Keller
To: CCP4BB@JISCMAIL.AC.UK Sent: Thursday, July 16, 2009 12:15 PM Subject: [ccp4bb] MAD wavelength Dear All: Next week we are going to try some seleno-Met labeled crystals. We checked the literature to try to find out the peak wavelength that has been used for SAD or MAD data colle

[ccp4bb] MAD wavelength

2009-07-16 Thread Jerry McCully
Dear All: Next week we are going to try some seleno-Met labeled crystals. We checked the literature to try to find out the peak wavelength that has been used for SAD or MAD data collection. But they are slightly different ( may be 50 ev) in different papers. I guess this is due