Re: [ccp4bb] Lowest resolution you can do MR with

2009-04-02 Thread Bjørn Panyella Pedersen
I guess it depends on your criteria for success. We made a successful MR using data to 8Å with a search-model with 20% identity covering 90% of the target. The resultant phases gave a map where a few new 'blobs' could be observed. Not very useful, but the MR-phases could be used to solve the HA

Re: [ccp4bb] Lowest resolution you can do MR with

2009-04-01 Thread Christian Biertuempfel
Hi, I cannot really answer what the lowest resolution for MR is but I have been successful with 4 A data for a protein-DNA complex and so I encourage you to try your 3.6 A data set. Of course, it also depends on the quality of your data, in particular how well/how many low resolution reflections we

Re: [ccp4bb] Lowest resolution you can do MR with

2009-03-30 Thread Raji Edayathumangalam
If you look at the molecular replacement search parameters, you will find that the rotational and translational searches can be done at 4 Angstrom or lower values assigned to the 'high resolution' values. So the real worry in your case, in all likelihood, is not whether MR will work for 3.

[ccp4bb] Lowest resolution you can do MR with

2009-03-30 Thread Muthiah
What is the lowest resolution one can try to do molecular replacement with? I have a 3.6 angstroms resolution data for a protein-DNA complex and wondering whether I can try MR to see the density for DNA.