You might want to look into the upsalla compressed mask format (it's an
exact representation of a binary mask - compression is handled by just
tracking the start and end points of the stretches).
Pete
Hailiang Zhang wrote:
Hi,
As I understand, the general molecular mask generated by CCP4 (eg
Thanks Pavel. Its not huge, but I need to process massive cases. Svergun's
envelope function or spherical harmonics expansion provides some concise
mask description, but just not sure whether ccp4 or other facilities can
generate it handy (from a pdb file to an atomic mask!)
Thanks again!
Hailian
Hi Hailiang,
I guess you can store the map in CCP4 map binary format or convert it into
corresponding Fourier map coefficients and store them in MTZ format (note:
in this case if you convert them back into a mask it will not be a binary
function anymore) - both shouldn't take a huge amount of spac
Hi,
As I understand, the general molecular mask generated by CCP4 (eg
sfall+mapmask) are binary mask file which needs lots of memory space. I
just wonder whether we can generate some small mask files represented by,
say, envelope function (F(sita,psi))
(http://journals.iucr.org/d/issues/2001/10/00
