Re: [ccp4bb] Help please

2025-01-12 Thread Chandra Verma
ARES PRIVATE This is terrific. Many thanks Derek. Yes indeed this is what we are looking for chandra From: Derek Logan Sent: Monday, January 13, 2025 4:36 AM To: Chandra Verma Cc: CCP4BB@jiscmail.ac.uk Subject: Re: [ccp4bb] Help please CAUTION: External

Re: [ccp4bb] Help please

2025-01-12 Thread Derek Logan
Hi Chandra, If I understand correctly, you are looking for structures in which two ATP molecules have been seen to interact directly with each other. This has been observed several times in the ATP-cone domains of the enzyme ribonucleotide reductase (RNR) and its associated transcription factor

Re: [ccp4bb] Help please

2025-01-09 Thread Artem Evdokimov
https://pmc.ncbi.nlm.nih.gov/articles/PMC3901029/ One that comes to mind... not sure if this is what you are looking for. Artem On Thu, Jan 9, 2025, 20:23 Chandra Verma < 64fcc5b1f9c3-dmarc-requ...@jiscmail.ac.uk> wrote: > ARES PRIVATE > > Are there examples where anyone has seen two ATP mo

Re: [ccp4bb] Help please, COOT destroys PDB

2019-07-03 Thread ALEJANDRA ANGELA CARRILES LINARES
Awesome. Thank you. Just changing the "," to "." did the trick. Thing is, this setting hadn't been changed before and used to work perfectly. Thanks again. Ale Paul Emsley escribió: On 03/07/2019 05:20, ALEJANDRA ANGELA CARRILES LINARES wrote: I am currently having problems with COOT (runni

Re: [ccp4bb] Help please, COOT destroys PDB

2019-07-03 Thread Paul Emsley
On 03/07/2019 05:20, ALEJANDRA ANGELA CARRILES LINARES wrote: I am currently having problems with COOT (running on a Windows 10 environment). Thing is, whenever I write a PDB file (save new coordinates), next time I open them (whether it is on a Windows or Mac computer), bonds are unexistant. I

[ccp4bb] Help please, COOT destroys PDB

2019-07-03 Thread ALEJANDRA ANGELA CARRILES LINARES
Hi there! I am currently having problems with COOT (running on a Windows 10 environment). Thing is, whenever I write a PDB file (save new coordinates), next time I open them (whether it is on a Windows or Mac computer), bonds are unexistant. I reckon something is wrong when the file is writt

Re: [ccp4bb] Help Please!

2012-09-18 Thread Edward A. Berry
Not to worry- since you carefully preerved the original files, you can easlily recover. You just need to boot a live CD like DSL or fdora live (or maybe even Tom's Root Boot disk) to bring up a system that can mount your filesystem and allow you to undue the failed experiment. Recent fedora live

Re: [ccp4bb] Help Please!

2012-09-18 Thread Tim Gruene
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Dear Jie Liu, libc is a very basic library and your Linux box is close to unusable without it or with the wrong version. Your computer would probably not boot anymore. - From what you describe, though, it should be simple to fix the problem. Find the

Re: [ccp4bb] Help Please!

2012-09-18 Thread David Schuller
Those commands which do not work apparently require the version of libc that you replaced. If your description is accurate, you did not actually delete the file, but merely renamed it. You can boot up from your Linux (this is Linux, right?) installation disk in "RESCUE" mode and put the file b

[ccp4bb] Help Please!

2012-09-18 Thread jie liu
Dear you all I really need your help. I was trying to install ccp4i Package Manager, and got an error saying "/lib64/tls/libc.so.6 version 'GLIBC-2.4' not found". The file '/lib64/tls/libc.so.6' was actually linked to 'libc-2.3.4.so'. I thought this one might be out of date. So I found a newe