Roberto,
An also less than optimal work around might be to take your refined
.pdb from PHENIX or CCP4 and run it through the downgrade utility on
MolProbity to change to PDBv2.3 format before working in Coot. I
don't think it is necessary to convert back to PDBv3.0 for
phenix.refine, but MolProbi
2.2 GHz
>
> Heisenberg was probably here!
>
>
>
> From: CCP4 bulletin board [mailto:[EMAIL PROTECTED] On Behalf Of
> Roberto Steiner
> Sent: Thursday, June 19, 2008 10:27 AM
> To: CCP4BB@JISCMAIL.AC.UK
> Subject: [ccp4bb] Coot and Hs
Hi Paul,
How can I add Hs (hydrogens) stereochemically to protein or peptide using COOT
without altering the coordinates of non-hydrogen atoms.
Thanks. Sam.
> Date: Thu, 19 Jun 2008 15:57:46 +0100
> From: [EMAIL PROTECTED]
> Subject: Re: [ccp
898 8631 Fax: (716) 898 8660
Email: [EMAIL PROTECTED] Telepathy: 42.2 GHz
Heisenberg was probably here!
From: CCP4 bulletin board [mailto:[EMAIL PROTECTED] On Behalf Of
Roberto Steiner
Sent: Thursday, June 19, 2008 10:27 AM
To: CCP4BB@JISCMAIL.AC.UK
Subjec
Dear Roberto,
Roberto Steiner wrote:
Dear all,
a problem possibly at the coot/mmdb interface...
Indeed.
If one uploads a pdb file (from phenix.refine in the example below)
that contains Hs into Coot and then writes it out (with or without any
modification done on it) Coot shifts the HG2n
Dear all,
a problem possibly at the coot/mmdb interface...
If one uploads a pdb file (from phenix.refine in the example below)
that contains Hs into Coot and then writes it out (with or without
any modification done on it) Coot shifts the HG2n of THR on the
right by one column space. Beca
