Re: [ccp4bb] Channel inside a protein

Priya, We have used a program called CAVER to find channels and cavities in our protein. You can download it and get instructions on its use at http://loschmidt.chemi.muni.cz/caver/ On Mon, Nov 10, 2008 at 10:21 AM, hari jayaram <[EMAIL PROTECTED]> wrote: > Hi Priya , > > I would recommend MOLE

Re: [ccp4bb] Channel inside a protein

, 2008 4:31 PM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] Channel inside a protein Hello Priya, Here is a great example of the identification of a channel in a protein. The authors used CAVENV to identify the channel and confirmed the channel by solving the structure of Xenon-pressured

Re: [ccp4bb] Channel inside a protein

Hello Priya, Here is a great example of the identification of a channel in a protein. The authors used CAVENV to identify the channel and confirmed the channel by solving the structure of Xenon-pressured crystals. Hector Xenon in and at the End of the Tunnel of Bifunctional Carbon Monox

Re: [ccp4bb] Channel inside a protein

Hi Priya , I would recommend MOLE from the list kindly compiled by "Jiamudu" on the CCP4 wikiThe list is available at the link below http://strucbio.biologie.uni-konstanz

[ccp4bb] Channel inside a protein

Hello All, Is there any program that can find if there is a channel inside a protein? I also would like to know what are the alternative ways to find out a channel inside a protein. Thanks a lot. Priya