Re: [ccp4bb] About weighting factor settings in new ccp4i2

2017-07-26 Thread Christian Roth
The simple matrix weighting option (x-ray/restraints weight) is under main refinement option and set automatically. Change that to manually and you can put the value in if you want to avoid too many keywords. There is even an option in advanced parameters to run several quick refinements to get

Re: [ccp4bb] About weighting factor settings in new ccp4i2

2017-07-24 Thread Jon Agirre
Dear Xu, you can input those keywords in the text box under 'Advanced options' in the 'refinement' task. Just make sure you click somewhere else after you're done putting the keywords in in order to have the text validated by the interface. Best regards, Jon On 24 July 2017 at 23:01, Liu, Xu wr

[ccp4bb] About weighting factor settings in new ccp4i2

2017-07-24 Thread Liu, Xu
Hi, In the new cpp4-7.0.042 (ccp4i2), where can I put in the weighting factor for B factor restrain weight (the ‘WBSKAL' setting) and/or x-ray terms relative to geometric restrains (the ‘MATRIX’ setting ) in refmac5? Basically I want to plug in those weighting factors from pdbredo into REFMAC5