On Wed, Dec 31, 2014 at 10:11 AM, Faisal Tarique
wrote:
> I request you to please tell me the three letter code for pyridoxine..
>
You can find the appropriate residue code for any molecule previously
deposited in the PDB - which includes pyridoxine - by simply searching for
the conventional nam
Hello everyone
Wishing you all a very happy new year..
I request you to please tell me the three letter code for pyridoxine..
--
Regards
Faisal
School of Life Sciences
JNU
s.
Cheers,
Robbie
> -Original Message-
> From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of
> Paul Emsley
> Sent: Thursday, October 02, 2014 13:31
> To: CCP4BB@JISCMAIL.AC.UK
> Subject: Re: [ccp4bb] 3 letter code
>
> On 02/10/14 11:50, Faisal Tarique wrote
gens.
>
> Cheers,
> Robbie
>
> > -Original Message-
> > From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of
> > Paul Emsley
> > Sent: Thursday, October 02, 2014 13:31
> > To: CCP4BB@JISCMAIL.AC.UK
> > Subject: Re: [ccp4bb] 3 letter
n Behalf Of
> Paul Emsley
> Sent: Thursday, October 02, 2014 13:31
> To: CCP4BB@JISCMAIL.AC.UK
> Subject: Re: [ccp4bb] 3 letter code
>
> On 02/10/14 11:50, Faisal Tarique wrote:
> >
> >
> > I request you to please tell me the 3 letter code for p nitrophenyl
>
Hi Faisal
The 3letter code for p nitrophenyl phosphate would be 4NP
http://www.rcsb.org/pdb/explore/explore.do?structureId=1D1Q
On Thu, Oct 2, 2014 at 4:20 PM, Faisal Tarique
wrote:
>
> Hello everyone
>
> I request you to please tell me the 3 letter code for p nitrophenyl
> phosphate..
> --
> R
When I google "3 letter code for p nitrophenyl phosphate" the second site
listed is:
http://www.ebi.ac.uk/pdbe-srv/pdbechem/chemicalCompound/complete/4NP
Which looks like it might contain the answer you seek.
HTH,
Dave
[image: David Briggs on about.me]
David Briggs
about.me/david_briggs
<
Thank you..i got it
On Thu, Oct 2, 2014 at 5:04 PM, Andreas Förster
wrote:
> I took the liberty of googling this for you. I trust that other search
> engines will give the same answer. Try your favorite next time.
>
> http://www.ebi.ac.uk/pdbe-srv/pdbechem/chemicalCompound/complete/4NP
>
>
> A
I took the liberty of googling this for you. I trust that other search
engines will give the same answer. Try your favorite next time.
http://www.ebi.ac.uk/pdbe-srv/pdbechem/chemicalCompound/complete/4NP
Andreas
On 02/10/2014 11:50, Faisal Tarique wrote:
Hello everyone
I request you to
On 02/10/14 11:50, Faisal Tarique wrote:
I request you to please tell me the 3 letter code for p nitrophenyl
phosphate..
No. But here's how to find it yourself:
Go to rcsb.org
"nitrophenyl phosphate" -> Search
Top hit in "Chemical Name" table.
or similarly File -> Search Monomer Library
Hello everyone
I request you to please tell me the 3 letter code for p nitrophenyl
phosphate..
--
Regards
Faisal
School of Life Sciences
JNU
You can use any acronym and your dictionary file overrides any existing
entry.
but check at the RSCB or EBI if your ligand already has a defined ID.
Isnt a dsn6 file a map file, whereas an mtz file is a list of reflections?
You can calculate a CCP4 map from your mtz file, then read that into O
On Thu, 25 Jan 2007, S. Shanmuga Sundara Raj wrote:
> Hi,
>
> 1) I am working with two ligands, cyclopropanemethanol
> and cyclobutanemethanol. The 3 letter code for them
> CPM and CBM (i thought of using) were assigned to
> other ligands. Is there any standard procedurre to
> name them. I would
1) I am working with two ligands, cyclopropanemethanol
and cyclobutanemethanol. The 3 letter code for them
CPM and CBM (i thought of using) were assigned to
other ligands. Is there any standard procedurre to
name them. I would like them to use in Refmac and
coot.
while you refine your structure
Hi,
1) I am working with two ligands, cyclopropanemethanol
and cyclobutanemethanol. The 3 letter code for them
CPM and CBM (i thought of using) were assigned to
other ligands. Is there any standard procedurre to
name them. I would like them to use in Refmac and
coot.
2) How do I convert mtz file
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