[ccp4bb] Post-doc in structural bioinformatics/robotics/machine learning (Erlangen, Germany)

2019-02-25 Thread van den Bedem, Henry
Post-doctoral/PhD position in the Chair of Applied Dynamics Friedrich-Alexander-Universität Erlangen-Nürnberg The position is part of a DFG-funded project ‘A mechano-geometric framework to characterize macromolecular ensembles’ at the interface of robotics, structural bioinformatics and machi

[ccp4bb] post-doc position at SLAC/Stanford University

2018-01-09 Thread van den Bedem, Henry
Post-doctoral position in the Biosciences Division at SLAC National Accelerator Laboratory/Stanford University The Biosciences Division at SLAC National Accelerator Laboratory/Stanford University has an opening for a post-doctoral position. Our group works at the interface of computation and exp

Re: [ccp4bb] rigid flexible analysis

2017-01-29 Thread van den Bedem, Henry
KGS software can do this, as well as sampling based on rigidity (10.1016/j.jmps.2015.06.006 or 10.1021/acs.jctc.5b00995). The software is available from github: https://github.com/ExcitedStates/KGS. Henry From: CCP4 bulletin board on behalf of Ga

[ccp4bb] Job posting: Postdoc jointly with Stanford Mechanical Engineering, Structural Biology, and SLAC

2016-10-03 Thread van den Bedem, Henry
Postdoctoral Position jointly with Stanford Mechanical Engineering, Structural Biology, and SLAC A postdoctoral position is available immediately, jointly between the Mechanical Engineering (Dr. Ellen Kuhl) and Structural Biology (Dr. Soichi Wakatsuki) Departments at Stanford University, and t

Re: [ccp4bb] Room temperature data collection

2014-02-06 Thread van den Bedem, Henry
It¹s not just possible, but desirable! There¹s evidence that conformational ensembles can be accessed in RT crystallography data, but that these are frozen out in cryo data (aforementioned Fraser et al., Accessing protein conformational ensembles using room-temperature X-ray crystallography. PNAS,

[ccp4bb] ACA 2014, Albuquerque: invitation to submit abstracts to "Opportunities in structural biology with new light sources" session

2014-02-05 Thread van den Bedem, Henry
On behalf of Soichi Wakatsuki: Dear all We would like to invite you submit abstract to the structural biology session: "Opportunities in structural biology with new light sources" scheduled from 1:30PM to 5:00PM on May 28, 2014 as part of the American Crystallography Association meeting in Alb

[ccp4bb] post-doc position at SSRL

2011-10-17 Thread van den Bedem, Henry
Modeling Conformational Ensembles of Proteins and Complexes A post-doctoral position with a focus on modeling conformational ensembles of proteins and complexes is available immediately in the Structural Genomics Division of Stanford Synchrotron Radiation Lightsource at the SLAC National Accel

Re: [ccp4bb] loop modelling?

2009-11-01 Thread van den Bedem, Henry
Tommi, If you don't have density, LoopTK is a C++ library with robotics-inspired algorithms that allows you to generate a large number of clash-free conformations: https://simtk.org/home/looptk. Henry -Original Message- From: CCP4 bulletin board [mailto:ccp...@jiscmail.ac.uk] On Behalf