Re: [ccp4bb] Softwares for Protein-Protein docking!

2010-06-08 Thread Rotem Sertchook
See the list in the following link http://bip.weizmann.ac.il/toolbox/structure/binding.htm#pp Good Luck Rotem Sertchook On 8 Jun, 2010, at 21:59, xaravich ivan wrote: Dear CCP4 users, Though this is not directly linked to ccp4, i bet many of you have solved crystal structures of the ligand

Re: [ccp4bb] homology modelling using sequence alignment

2010-03-03 Thread Rotem Sertchook
ampus Box 8052, 660 S. Euclid Saint Louis, MO 63110 --- Rotem Sertchook, Ph.D. Bioinformatics Unit, Biological Services Weizmann Institute of Science, Rehovot 76100, Israel. Phone: +972-8-934-4315 (office) |

Re: [ccp4bb] Alternatives to ChemDraw 3D

2010-02-08 Thread Rotem Sertchook
le in many formats (e.g GROMACS, CNS...). PRODRG support only common atom types (N, C, O, S, P, Cl, I, Br, F) Rotem - Rotem Sertchook, Ph.D. Bioinformatics Unit, Biological Services Weizmann Institute of Science, Rehovot 76100, Israel. -

Re: [ccp4bb] Protein Protein interactions

2009-08-18 Thread Rotem Sertchook
wrote: Hello All, Can anyone tell me what are the programs used to find out the different interactions in a protein. I am talking about both intra and intermolecular interactions. Thanks in advance. Mariah -- Mariah Jones Department of Biochemistry University of Florida Rotem

Re: [ccp4bb] homology modeling

2009-05-05 Thread Rotem Sertchook
512 1954 Mobile / SMS: +31 6 28 597791 -------- --- Rotem Sertchook, Ph.D. Bioinformatics Unit, Biological Services Weizmann Institute of Science, Rehovot 76100, Israel.