Hello!!
If anyone is using the AMBER OL3 force field kindly send it to me. I am
working on RNA str prediction. It would be a great help if you can send me
this.
Thank you
Sincerely
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Hello!!!
Kindly reply to this email, who are working in the RNA str prediction
domain or RNA str.
Thankyou
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Hii Everyone!!
Cell has many types of RNA but the major ones are rRNA, tRNA, and mRNA,
rRNA, and tRNA other small RNA contains the secondary Str and 3D str but
incase of mRNA the UTR region contains secondary Str but the translational
region contains no secondary str. In my case, I want to predict
Hello Everyone!!
I wanted to use Amber99 Force field not that is inbuilt in Gromacs. Is
anyone downloaded the updated Amber99 Force field please provide me the
downloaded and reference where I can download it. I have tried many times
but can't able to find the updated one. Kindly provide me the u
Hi Everyone!!
I am currently working on nucleic acid structure prediction. If anyone is
also involved in research on nucleic acids, especially RNA, please let me
know. I have a PDB ID for an RNA molecule, but this structure contains
10-12 missing nucleotides and a sugar-phosphate break. Could you
Hello everyone!!
I am working on tertiary Structure prediction of RNA molecule. I have
generated approx 20k structure through the Rosetta denovo method. I didn't
get any method for selecting the accurate or near - native structure.
Kindly help me out.
I have use an ARES tool which is used for ca
Hello everyone..
Greetings of the day!!
I am working on RNA and it's structure prediction.
I have a RNA sequence which is about less than 160 nucleotide sequence, I
don't have it's structural information. Please suggest me what kind of
software can be used which can provide me structure with High
Hello..
Greetings of the day!!
I am working on RNA and it's structure.
I have a RNA sequence which is about less than 160 nucleotide sequence, I
don't have it's structural information. Please suggest me what kind of
software can be used which can provide me structure with High accuracy and
if ther
Hello,
I have a long list of PDB ids and I needed the all the biological assembly
for each PDB Id, so in this case how I can get these biological assembly in
PDB format.
Please guide me how to get these assemblies, manually it wouldn't be
possible for each PDB I'd.
Thankyou
###
Hii!!
I have 1500 processed PDB files and I need the R factor value for each pdb
files. How I get this R factor value, because it's there initially but,
after processing, some data from PDB is deleted only the atom and
coordinate information is there no header information in the PDBs. Manually
to
Hello!!
I have 1500 processed PDB files and I need the R factor value for each pdb
files. How I get this R factor value, because it's there initially but,
after processing, some data from PDB is deleted. Manually to get R factor
is not possible.
Please suggest me, how to get this R factor value f
Hello Everyone!!
Greeting of the day
I want to use the NACCESS Server for the calculation of solvent accessible
surfaces but I cant be able to install it after downloading it. I have
tried linux based but cant be able to install it. PLease guide me how to
install it and If there are other Server
gt;
> Marcin
>
> On Tue, Apr 19, 2022 at 2:01 PM Abhilasha Thakur
> wrote:
> >
> > Hello!!
> > Greeting of the day,
> >
> > I want to know regarding file conversion from mcif file format to PDB
> format of proteins.
> > Is there any program or softwa
Hello!!
Greeting of the day,
I want to know regarding file conversion from *mcif file format *to *PDB
format of proteins.*
Is there any program or software that can be used to change one format to
another format. KIndly guide me about programs used for file conversion or
any other medium like pyth
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