Re: [ccp4bb] phenix.table_one issues

2024-07-17 Thread Dale Calleja
Thanks Pavel, I was not aware of the Phenix mailing list, thanks for letting me know. Could you please direct me to where I can sign up to this? Thanks. Dale. Dale Calleja PhD Student, Komander Lab Ubiquitin Signalling Division WEHI 1G Royal Parade Parkville VIC 3052 Australia Email callej.

Re: [ccp4bb] phenix.table_one issues

2024-07-17 Thread Pavel Afonine
Hi Dale, First off, there is a Phenix mailing list for Phenix-specific questions. We can investigate the issue if we manage to reproduce it. For this, we need the input files you used to make Table 1. Would you mind sharing them? If you choose to send us the files, please send them to me directly

[ccp4bb] phenix.table_one issues

2024-07-17 Thread Dale C
Hi all, I am currently trying to generate a Table 1 in Phenix. I currently have inputted into phenix.table_one, the outputted from model and reflection file from phenix.refine as well as my .cif restraints file for the bound small molecule ligand. Source for Rfactors and resolution/bins are set

Re: [ccp4bb] Three years postdoc position at University of Kent

2024-07-17 Thread Mohinder Pal
Dear CCP4BB members, I am delighted to share that a three-year postdoc position is available in my group. We are looking for an enthusiastic individual interested in biochemistry and structural biology, especially single-particle cryo-electron microscopy and X-ray crystallography techniques. Th

Re: [ccp4bb] COOT 1.1 and Symmetry

2024-07-17 Thread Paul Emsley
On 12/07/2024 13:12, Karol Woloszyn wrote: Hello, I’m a COOT 1.1.09 user on Fedora 40 as well as MacOS, working on DNA model refinement. I’ve noticed since updating to 1.1.09, the cell and symmetry master switch no longer brings up any symmetry molecules. I remember in older versions (I was