Re: [ccp4bb] Lion kills moleman (and all other USF programs on the Mac)

2011-07-22 Thread Bosch, Juergen
According to your link it's not worth it right ? I mean lion taming ? Jürgen On Jul 22, 2011, at 6:59 AM, Gerard DVD Kleywegt wrote: Hi all, Just a heads-up - if you upgrade to OSX Lion, your trusty old USF executables will no longer work. Help is on its way - in the near future the indefatigab

[ccp4bb] VWR Symphony Incubator?

2011-07-22 Thread Elena Menichelli
Dear all, we're in urgent need to replace an old Precision Scientific Low Temperature 815 Incubator. We could quickly get a VWR Symphony Low-Temperature BOD Incubator but before purchasing I was wondering if anyone has any experience with this incubator for protein crystallization. I'd apprecia

[ccp4bb] CCP4 6.2.0 Released

2011-07-22 Thread ronan . keegan
Dear All, We're very pleased to announce the release of the latest version of the CCP4 software suite. Version 6.2.0 (Giggleswick) is now available from the CCP4 download website: http://www.ccp4.ac.uk/download.php The release is available for Linux, Mac OSX and Windows platforms. Updates inc

Re: [ccp4bb] hello

2011-07-22 Thread Ed Pozharski
I recall using CME some time ago (within last couple of years) without problems. Also, an alternative approach is to incorporate BME as a separate residue instead - the disulfide bond will be correctly identified by refmac. I would think ideologically this is more appropriate - using a different

Re: [ccp4bb] Lion kills moleman (and all other USF programs on the Mac)

2011-07-22 Thread Andreas Förster
As Lion seems to be, above all, an wonky iPad emulator, you're probably better off keeping the Snow Leopard alive until Apple obsolesces it in a few months. Andreas On 22/07/2011 11:59, Gerard DVD Kleywegt wrote: Hi all, Just a heads-up - if you upgrade to OSX Lion, your trusty old USF ex

Re: [ccp4bb] Lion kills moleman (and all other USF programs on the Mac)

2011-07-22 Thread Xiaoguang Xue
Can I use the Linux version under Xterm (from Macports)? I noticed that the Fink repository will not run on the Lion system, but it looks like Macports is OK, because they have a new branch for Lion. And they also have a dmg install file for Lion. On Fri, Jul 22, 2011 at 12:59 PM, Gerard DVD Kleyw

[ccp4bb] Lion kills moleman (and all other USF programs on the Mac)

2011-07-22 Thread Gerard DVD Kleywegt
Hi all, Just a heads-up - if you upgrade to OSX Lion, your trusty old USF executables will no longer work. Help is on its way - in the near future the indefatigable and intrepid Lion-taming heroes of the USF will release a distribution kit that includes source code. However, for now you may

Re: [ccp4bb] Concentrating a protein solution - subbu

2011-07-22 Thread Stephen Weeks
Subbu, Don't forget you crystallization screen can also be used to find a condition that your protein may be happier in ! As you already have setup a screen of your protein, have a look at your drops again and see if there are any conditions that are clear. If so, is there a consistent theme

Re: [ccp4bb] Phaser and Molrep gave different solutions

2011-07-22 Thread ccp4
The self rotation isnt the correct input to the translation function - just run the Auto-Molrep option.. Eleanor On Thu, 21 Jul 2011 20:57:02 +0800, Hubing Lou wrote: > I also processed with Imosflm and ran Pointless, it was P21. Also it was > indicated by the "Intensity systematic absences" in H

Re: [ccp4bb] Concentrating a protein solution - subbu

2011-07-22 Thread M T
A solution could be to control the solubility of your protein in different pH and salts (you can also add some additives) by using the Thermal Shift Assay. You may find a better buffer in which to concentrate your protein. If you think that the reason of the low diffraction is the quality of your

Re: [ccp4bb] hello

2011-07-22 Thread Garib N Murshudov
Dear AfshanMake sure that group name for CME is peptide (or L-peptide).  In the new version CME is peptide. I am not sure it was the case in older versions. I attach CME as a peptide. You can add this into your dictionary.Then CME can become part of a peptde. It would also be good to remove all the

Re: [ccp4bb] hello

2011-07-22 Thread Herman . Schreuder
Dear Afshan, I have been struggling with the same irrating "feature" (I would call it a bug), which was for me one of the reasons to abandon refmac. For some reason and against PDB standards, refmacs wants linked amino acids to be consecutively numbered and otherwise decides that they are not lin