Bah...no Kindle Edition...I guess I'll have to keep reading The Grand Design.
James
On Mar 1, 2011, at 4:40 PM, Bernhard Rupp (Hofkristallrat a.D.) wrote:
> For those who concern themselves with such matters, the 1973 edition of
> Sir Harold Jeffreys' "Scientific Inference" has just been reiss
To all Laue experts up here
How does a Laue data is collected?
Thanks in advance to all
PSP
On Fri, Jan 28, 2011 at 3:43 AM, REX PALMER wrote:
> What programs are available for processing Laue data to produce an
> intensity data set?
> Are explanatory notes or publications available?
>
> Rex P
there is a small but brave community that actually
attempted to collect Laue data on proteins with
modern synchrotron sources. They are all centered
around Keith Moffat in Chicago and Michael Wulff
in Grenoble. Maybe you contact these people:
D. Bourgeois at the ESRF, V. Srajer or Z. Ren at the
AP
A postdoctoral position at research officer/senior research officer
level is available in the laboratory of Professor Jenny Martin,
Institute for Molecular Bioscience, University of Queensland,
Brisbane, Australia.
The position is for one year in the first instance, with the
possibility o
For those who concern themselves with such matters, the 1973 edition of
Sir Harold Jeffreys' "Scientific Inference" has just been reissued as a
Cambridge paperback.
Together with AFW Edwards' "Likelihood" this is good material for the finer
aspects of
inference I did only cursory touch in BMC chapt
> I heard somewhere that the reason chickens (which have eyes on
> the opposite sides of their heads, giving binocular vision a
> different meaning) bob their heads up and down is to get a 3D
> perspective.
Check out egrets when they are fishing--definitely triangulating,
maybe refraction-artifact
Jim Pflugrath wrote:
One should be able to see 3D from the depth-cueing and by keeping the view
in motion.
Don't ever use stereo glasses in a public seminar.
"putting the molecule in motion" is a good way to let the audience see 3D.
I like to make a small animated gif ("rocking gif") which
Ah! The question of to stereo or not to stereo! There has to be a
scientific reason why this question is more popular than asking for what
Linux distro is more fashionable this spring or why an Rmerge of 0.90 in
the outermost shell is good for you and your structure.
I am offering my two (conf
Dear group members, I would also like to bring this second opening to your
attention:
ANNOUNCEMENT TITLE: 2 years Post-doctoral position in structural immunology
with applications in T cell and NK cell receptor recognition of MHC class I and
class II complexes in Stockholm, Sweden
DEADLINE F
Dear group members, I would like to bring the following opening to your
attention:
ANNOUNCEMENT TITLE: 2 years Post-doctoral position in structural parasitology
in Stockholm, Sweden
DEADLINE FOR APPLICATIONS: 25 Mars 2011 or until position filled
TYPE OF POSITION: Post-doc
AFFILIATION INSTI
I will offer my view.
I hate stereo glasses and hate stereo in general.
One should be able to see 3D from the depth-cueing and by keeping the view
in motion. For fitting, I like to flip the view by 90 degrees. I know I am
going to move in displayX and displayY, but never in displayZ. I then
Dear All,
Thank you for your suggestions. Many of you asked what the occupancies
were in the region and they were all one, so partial occupancy was not
the problem.
I was using TLS restraints during the refinement when this problem
happened. Given the suggestions that TLS may be a problem an
The Viewsonic and Samsung monitors are both 1680x1050 resolution. A new
crop of monitors came out last year with 1920x1080 resolution.
We have an Acer GD235HZ and a Planar SA2311W, each operating off a
Quadro 3800 with the optional stereo connector.
Other monitor models compatible with the nV
Dear colleague,
We would like to draw your attention to the call for the * International
Ph.D. Programme* at the Spanish National Cancer Research Centre (CNIO) in
Madrid. We would greatly appreciate if you could forward the information
below to potential candidates.
The CNIO offers excellent tr
Judith Reeks wrote:
Dear All,
I am currently refining a structure using the latest experimental
version of Refmac (5.6) and there seems to be a problem with my Fo-Fc
map. There is a region where I have fitted residues to the electron
density but after refinement there is still positive el
when these kind of things occur to me it always is a silly mistake like:
- occupancies of the new residues set to 0.0
- reading in the old pdb-file when running refmac instead of the new one
- calculating the map with the old refmac output instead of the new output
- reading in and/or displaying th
Dear All,
I am currently refining a structure using the latest experimental
version of Refmac (5.6) and there seems to be a problem with my Fo-Fc
map. There is a region where I have fitted residues to the electron
density but after refinement there is still positive electron density
assigned
Hi again,
I'd like to ask a question about the pedagogy of stereo. That is, using
stereo with students in the classroom.
Do you all find that, after setting up these elaborate stereo devices,
students really use the stereo or do they tend not to?
I am a huge fan of stereo - and frankly her
Dear Colleagues,
We hope that you are planning to attend the International Conference on
Structural Genomics 2011, which will be held in Toronto, Canada on May 10-14,
2011.
Due to technical difficulties with the registration page, we have extended both
the early registration and abstract sub
Well, my personal "museum of image file formats" is here:
http://bl831.als.lbl.gov/example_data_sets/
Which I have organized by light source since although the "file format"
is technically the same for a given detector model, the meaning of the
contents of the header (such as the beam center)
Dear Harry,
as you mention two screens: have you ever tried to use two 3D screens?
We currently have that setup but are not too happy with it. So I wonder
if its a general problem or very specific to our setup.
Best regards,
Alexander
From: CCP4
We are looking for a PhD student in cryo electron microscopy. Our laboratory
(http://lbr.web.psi.ch/) is working with a number of membrane proteins and in
particular G protein coupled receptors. The goal is to prepare stabilized
membrane proteins in a highly functional form and reconstitute them
BS"D
Dear Andreas
We have several examples of Linux working with the Quadro FX3800
with the optional 3pin connector, and either the Viewsonic 3D
display, or the Samsung 2233RZ. We find the Samsung to have better
image quality. As noted by others, in Europe you must specifically
ask
Dear All
I am looking for example files of most common detector formats eg from the
mosflm doc (below). I have some of the most common ones we use routinely eg
Mar, ADSC and R-Axis but if anyone has by chance compiled an archive of example
files, or can point me in the right direction that wou
Andreas,
I can only second what Chris was saying. We have the same setup (FX3800
with separate riser for stereo connection) used in all of our machines
and it works very well. In terms of monitor I would recommend to spend a
bit more money and go with an Alienware or Asus 3D LCD, both are running
>>> Andreas Eichinger 03/01/11 9:24 AM >>>
> We are currently setting up a new 3D workstation with a Samsung
> SyncMaster 2233RZ monitor and a Nvidia 3D vision glasses kit on a
> Redhat Enterprise Linux box. According to Nvidia, a Quadro FX 4800,
> Quadro FX 4600 or Quadro FX 3700 graphics
dear all,
i was trying to run the sad tutorial data in phenix autosol. the
p9 sad worked really well in the fast mode building almost the entire
structure, but the se17 sad data does not give good results. it shows an fom of
34.6 and r factor of 33.2 in P41 spacegroup. autobuild bui
Yes, we recently installed such a system and it works very well.
Minor drawback: the 3D Vision system interferes with the older 3D
stereo (NuVision) system - we have 4 stereo workstations in the same
room, 3 old and one new.
We don't know yet whether there are interference problems between
mac
Dear colleagues,
We are currently setting up a new 3D workstation with a Samsung
SyncMaster 2233RZ monitor and a Nvidia 3D vision glasses kit on a
Redhat Enterprise Linux box. According to Nvidia, a Quadro FX 4800,
Quadro FX 4600 or Quadro FX 3700 graphics card can be used for 3D on
Linux
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