Hello all!
Our good old 100MHz pentium web server died a (too long) while ago and
while it was down several people have asked when it would be back up. I
reinstalled it over the weekend and as far as I can see it all works
again. If you had been using it you can do so again at the same address
It's guessing time, but it looks like you don't have write permission to
the directory in which ccp4i/refmac is trying to direct the output file
(or maybe the directory no longer exists, etc).
Jhon Thomas wrote:
> Hi all
> I am using CCP4i, and running refmac for the
> refinement
Hi all
I am using CCP4i, and running refmac for the
refinement of the my data. I have ran this many times earlier
successfully. Now as i run the refamc5 , it runs successfully and
complete the job,but
not writing any output file.
At the end of the logfile, i get a sat
Hi All,
I am working on an Fe-S cluster protein. Generally, I do the initial
screen using the commercial kits, like Hampton screen kits, etc.. Do you
have any experience in degassing these commercial kits before setting up
the trays ? How to deal with the solutions in the kit which contain
orgainc
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Is d*trek free these days ? (see original message from Bryan).
Boaz
- Original Message -
From: Jim Pflugrath <[EMAIL PROTECTED]>
Date: Tuesday, May 22, 2007 3:59
Subject: Re: [ccp4bb] calc. of rots to align recip. space axes w/ beam
To: CCP4BB@JISCMAIL.AC.UK
> d*TREK does t
Thank you all for your suggestions. Unfortunately I am still stuck with the
segmentation fault problem.
The swap partition is mounted fine.
Setting max_chains to a lower number does nothing.
There's nothing wrong with my selection criteria (0 atoms were selected as
rigid groups, 36 for ann
Hi Siva,
SFCHECK (part of CCP4i) has a very handy option for this. From the
command line:
% mkdir mydir
% sfcheck -f mydata.mtz -po mydir/ -out u -r
% gv mydir/sfcheck_.ps
(or ghostscript/xpsview/whatever postscript viewer you have)
This will generate a number of output files, includin
Dear All,
The authors of the following paper used molecular replacement of the
substructure to locate the heavy atoms. The known 11-fold symmetry meant that
the heavy atoms had to be in a circle - molecular replacement with circles of
different radii did the trick.
Antson et al. Nature, Vol
