Re: [Bioc-devel] Readme in Rmd and md formats; .Rbuildignore'd files

2025-03-15 Thread Lluís Revilla
Hi, On Fri, 14 Mar 2025 at 15:53, Marcel Ramos wrote: > > Hi, > > On 3/14/25 5:42 AM, Lluís Revilla wrote: > > Hi! > > Before moving to git (and shortly after), Bioconductor used to support > these kind of files. > > Can you point to where in the documentation these files were supported? I don't

Re: [Bioc-devel] PRONE Release Branch RELEASE_3_20 Not Updating

2025-03-15 Thread Kern, Lori via Bioc-devel
Please see related answer to a similar question https://stat.ethz.ch/pipermail/bioc-devel/2025-March/020862.html Release is not built everyday and takes longer to build. The pull for Thur report was Monday which was before your commit to git.bioconductor.org. It will likely appear in today's

[Bioc-devel] C++ compiler error on kunpeng2 ?

2025-03-15 Thread Katja Danielzik
Dear all, i have noticed that my package "MetaboDynamics" which employs stan models ,that are pre-compiled to C++ during installation, fails to install on kunpeng2 (and only there) with the following error message: /usr/bin/ld: cannot find -ltbbmalloc: No such file or directory collect2: error:

[Bioc-devel] possible ld issues at palomino7

2025-03-15 Thread Oleksii Nikolaienko
Hi Bioc team, my and several other packages (Rhtslib , bamsignals

[Bioc-devel] Bioconductor archive?

2025-03-15 Thread Lluís Revilla
Hi, Recently I learned thanks to Martin Morgan that there are some files with the Date/Publication fields for Bioconductor packages: https://bioconductor.org/packages/3.7/bioc/VIEWS. I'm trying to reconstruct which packages from CRAN and Biocondctor were available at any moment and it was very he