Re: [Bioc-devel] MOFA package deprecation

2021-02-08 Thread Kern, Lori
Yes. Im very sorry. I realized you requested this originally and I never changed the default message. I just pushed up now and it should propagate on tomorrow's build. Cheers, Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinf

Re: [Bioc-devel] Change maintainer email

2021-02-08 Thread Jakob Willforss
Hi, I am the maintainer of the Bioconductor package NormalyzerDE. My previous maintainer email (this one) will be inactivated in a month, and am thus changing the maintainer email to 'jakob.willfo...@hotmail.com'. I am walking through the following four-step procedure as outlined by a previ

[Bioc-devel] is it possible to disable i386 builds on bioconductor

2021-02-08 Thread Kevin Horan
    I have a package which randomly segfaults when running my unit tests only on windows i386, but never on x64, or any other OS. I can't imagine there are many out there still running i386 systems are there? Is it possible to just disable the i386 build on bioconductor so that the tests are

[Bioc-devel] List of Deprecated Package Bioc 3.13

2021-02-08 Thread Kern, Lori
The Bioconductor Team is continuing to identify packages that will be deprecated in the next release to allow for the Bioconductor community to respond accordingly. The list will be updated monthly. This is the current list of deprecated packages for Bioc 3.13 : Maintainer requested deprecation

Re: [Bioc-devel] is it possible to disable i386 builds on bioconductor

2021-02-08 Thread Martin Morgan
It's likely failing because your package has C source code that accesses memory in an invalid way. Likely the bug is present on all platforms, but only apparent, for the tests you have written, on Windows. The right thing to do is to fix the bug, rather than avoid by not running on the troubleso