Yes. Im very sorry. I realized you requested this originally and I never changed the default message. I just pushed up now and it should propagate on tomorrow's build.
Cheers, Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Britta Velten <britta.vel...@gmail.com> Sent: Saturday, February 6, 2021 4:53 AM To: Kern, Lori <lori.sheph...@roswellpark.org> Cc: bioc-devel@r-project.org <bioc-devel@r-project.org> Subject: Re: [Bioc-devel] MOFA package deprecation Hi Lori, a quick follow up question on the package depreciation of Mofa which you took care of a while ago. Would it be possible to also have the pointer to mofa2 on the landing page of the package instead of only in the startup message? There it simply reads https://www.bioconductor.org/packages/release/bioc/html/MOFA.html<https://secure-web.cisco.com/1Kz7i_eW1lTdwpbz7PFAPNXNzatDHK0J5r8kHh5H1FB402_tnyKBljYfXIsg70WRMOvwW9iiiOcpBntwfbDLXe9g2agna6_zQ2iZKYhWWduBMZYS8fuGoeUJWGMT1Gc9nV7ajn8ktXi-Wh96pgtvYB6KEBSBrHb2m0ze-Wyhq0dLSqkWbCLJp2xRmfs_CmiZWiEY_l0bd-v3ZInp-OrXLgN_rApq3cY2puIVPywMunvYzzcbXsVs7pYTkPUmSWE06jnjcrpv7PnmT3AClZSOW-UGpKqWIf9TXGE-MGn8EbwQPJ09XLFQbuWGwn7gg2uR3/https%3A%2F%2Fwww.bioconductor.org%2Fpackages%2Frelease%2Fbioc%2Fhtml%2FMOFA.html> "This package is deprecated. It will probably be removed from Bioconductor.� This has led to some confusion and it would be great to have the pointer to the new alternative package there. Thanks and best regards Britta Kern, Lori <lori.sheph...@roswellpark.org<mailto:lori.sheph...@roswellpark.org>> schrieb am Mi., 21. Okt. 2020, 13:42: Thank you for letting us know. Yes I can specialize the message to point users to MOFA2. I will take care of this later today. Does MOFA2 still use the accompanied data package MOFAdata or should that also be deprecated? Lori Shepherd Bioconductor Core Team Roswell Park Comprehensive Cancer Center Department of Biostatistics & Bioinformatics Elm & Carlton Streets Buffalo, New York 14263 ________________________________ From: Bioc-devel <bioc-devel-boun...@r-project.org<mailto:bioc-devel-boun...@r-project.org>> on behalf of Britta Velten <britta.vel...@gmail.com<mailto:britta.vel...@gmail.com>> Sent: Wednesday, October 21, 2020 7:01 AM To: bioc-devel@r-project.org<mailto:bioc-devel@r-project.org> <bioc-devel@r-project.org<mailto:bioc-devel@r-project.org>> Subject: [Bioc-devel] MOFA package deprecation Dear Bioconductor core team, I would like to deprecate the MOFA package as it has been superseded by MOFA2. Is it possible to add a note for users to turn to MOFA2 in the deprecation warning for MOFA? Best, Britta [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org<mailto:Bioc-devel@r-project.org> mailing list https://secure-web.cisco.com/1_1z1QNltOLeAraWsp-axiDgnfTGj_ZwWtwFOSXZI-H1g5vaPlr2VCQ-ZvJSQ3hfCrbHEmB785FbYH4oMnp7Z8PVOpjIoQXEhs6awTziuC5EIHLI5BJgNx65cm2mURMkG_pp4O6nhalCluMG_7EDZY7VdDMgoG9BFeeNiKUiiW6kyfxBzllk8Y0DfqZOi5NkIreIOJ6bdpwkpaPF6K6qiXOpSrz-IPO07lZBuxbSsMOvUPwcsY0grsmVcBhtMm2qmhsYaDKGyfNA-iQKB-IXOQtCkyaF2FrvLhACmyv7FH4_740F8HPumyQaa4GmuBXqu/https%3A%2F%2Fstat.ethz.ch%2Fmailman%2Flistinfo%2Fbioc-devel This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. This email message may contain legally privileged and/or confidential information. If you are not the intended recipient(s), or the employee or agent responsible for the delivery of this message to the intended recipient(s), you are hereby notified that any disclosure, copying, distribution, or use of this email message is prohibited. If you have received this message in error, please notify the sender immediately by e-mail and delete this email message from your computer. Thank you. [[alternative HTML version deleted]]
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