Thank you for your quick response and your contribution to Bioconductor!
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
From: Charles Warden
Sent:
Hey! Sorry to trouble y'all, but I'm the maintainer for the packages
polyester and ballgown.
I don't think my keys are linked up to pushing to those packages and I
was wondering if someone could help me out with that?
Thanks!
Jack
___
Bioc-devel@r-pr
Hi Jack,
User a.frazee has access to ballgown and j.leek has access to polyester. If
neither one of these is you, the first step is to write bioc-devel and request
access to the packages.
Once you have access, you need to have an SSH Key on file. This is explained
here:
https://bioconductor.or
Hi,
I'm trying to submit my first package. but I'm confused about the location
of the vignettes in my submitted package. It seems like BiocCheck is
expecting the vignettes to go in /vignettes directory but R
3.2+ expects them to go in /inst/doc directory. Wherever I put
them, one of the checks com
Hello, Armen.
Your vignettes should be located in / vignettes. The vignette
will be built automatically later.
2018-01-29 16:41 GMT-03:00 Armen Abnousi :
> Hi,
>
> I'm trying to submit my first package. but I'm confused about the location
> of the vignettes in my submitted package. It seems lik
On 01/29/2018 02:41 PM, Armen Abnousi wrote:
Hi,
I'm trying to submit my first package. but I'm confused about the location
of the vignettes in my submitted package. It seems like BiocCheck is
expecting the vignettes to go in /vignettes directory but R
3.2+ expects them to go in /inst/doc dire
Thanks for your answers, that helped but now there is another issue. The
vignette in vignettes/ directory is referring to a bib file for references.
The bib file is in the inst/ directory (so I have used
../inst/REFERENCES.bib) to point to it. I don't get any warnings on my
Linux computer when runn
Put the bib file in /vignettes. Perhaps see a couple of packages for
examples, including how to use BiocStyle
On Mon, Jan 29, 2018 at 3:26 PM, Armen Abnousi wrote:
> Thanks for your answers, that helped but now there is another issue. The
> vignette in vignettes/ directory is referring to a bib
Thanks! I ended up putting the references in the YAML rather than as a
separate bib file.
On Mon, Jan 29, 2018 at 5:27 PM, Kasper Daniel Hansen <
kasperdanielhan...@gmail.com> wrote:
> Put the bib file in /vignettes. Perhaps see a couple of packages for
> examples, including how to use BiocStyle
