Hi Bioconductor community,
I am a recent Bioc developer. I uploaded a package just before the deadline of
this BioC 3.3. During the admission process, the build machine was run with my
packages almost every two hours which allowed me to improve the package more
efficiently. However, now that I
I guess asking on the devel mailing list rather than sending mail to a
particular individual means that you get the benefit of whatever global wisdom
is available.
All packages are built nightly, in both release and devel, and across three
architectures. The build system is more complicated tha
Thanks Martin for your quick reply.
I really appreciate your comments to help me improve my package. As you comment
in the first lines, I have already downloaded the devel version of R and Bioc.
This is how I found out the changes in the dependencies of rowRanges function.
Regarding the other
Hi,
On Fr, 2016-04-22 at 10:53 +, Morgan, Martin wrote:
> All packages are built nightly, in both release and devel, and across
> three architectures. The build system is more complicated than
> building individual packages -- reverse dependencies need to be
> built, too, and successful builds
On Thu, Apr 21, 2016 at 8:35 AM, Martin Morgan <
martin.mor...@roswellpark.org> wrote:
>
>
> On 04/20/2016 11:15 PM, Aedin Culhane wrote:
>
>> Hi Vince
>> Agreed, I agree fData is over-simplification. But if data have an
>> associated "annotation", the feature annotation associated with it
>> shou
You could also run tests on Travis CI. That's what I do for my
packages. See https://travis-ci.org/lcolladotor/derfinder and
https://github.com/lcolladotor/derfinder/blob/master/.travis.yml for
an example. If you want to use Travis, check the main docs
https://docs.travis-ci.com/user/languages/r
O
Thanks Leonardo and Steffen,
I have just realized that Martin also mentioned travis in his reply but I
didn't know what he was talking about. I will try it.
Thank you again,
Carlos Ruiz
- Mensaje original -
De: "Leonardo Collado Torres"
Para: "Steffen Neumann"
CC: "Martin Morgan" , "
1. To Ruiz: right now there are tons of changes happening all the time
because we are close to a release. So what you're asking is much harder
than what you think it is. Basically, it'll not happen. What you first
and foremost need to do, is to setup a build on your local machine (which
is seems
Hi,
On Fr, 2016-04-22 at 10:32 -0400, Kasper Daniel Hansen wrote:
> ...
> 2. To others: I do agree that having preconfigured VMs for specific
> platforms would be very worthwhile, especially for Windows, as we have just
> seen with mzR.
Thanks again for your heroic help there !
> But it would als
