Re: [Bioc-devel] Integrating python into an R package

2020-02-18 Thread Vincent Carey
I would advise that you do not reimplement working methods but interface to them. Bioconductor's BiocSklearn package exposes aspects of scikit and you could have a look at that for one approach. The basilisk package in development is a more systematic way of gov

Re: [Bioc-devel] Integrating python into an R package

2020-02-18 Thread Turaga, Nitesh
Take a look at BiocSklearn. Nitesh > On Feb 18, 2020, at 8:11 AM, Zhang, David wrote: > > Dear all, > > I’m a bioinformatics PhD student at UCL who’s recently been trying to develop > an R package that has some python dependencies. Specifically, areas of my > current pipeline are written i