Re: [Bioc-devel] Git transition is happening August 16th.

2017-08-21 Thread Turaga, Nitesh
Hi Matthew, > On Aug 20, 2017, at 10:26 PM, Matthew Myint > wrote: > > Hi, thanks for the transition! Its nice to work from git without the need to > use svn. > > Anyway, I have a couple of questions regarding the usage of git > > 1) When syncing my own GitHub and the Bioconductor git repos

Re: [Bioc-devel] Git transition is happening August 16th.

2017-08-19 Thread Martin Morgan
Thanks Charles and Taigo, this should be fixed now. If not, can you re-open and comment on https://github.com/Bioconductor/bioc_git_transition/issues/34 ? Thanks! Martin On 08/18/2017 02:36 PM, Tiago Chedraoui Silva wrote: Any git command sending messages to the git server gave that warnin

Re: [Bioc-devel] Git transition is happening August 16th.

2017-08-18 Thread Martin Morgan
On 08/18/2017 12:21 PM, Tiago Chedraoui Silva wrote: I had the same problem, which is described below: https://askubuntu.com/questions/144235/locale-variables-have-no-effect-in-remote-shell-perl-warning-setting-locale-f I did the "Stop forwarding locale from the client" solution and it worked.

Re: [Bioc-devel] Git transition is happening August 16th.

2017-08-18 Thread Tiago Chedraoui Silva
I had the same problem, which is described below: https://askubuntu.com/questions/144235/locale-variables-have-no-effect-in-remote-shell-perl-warning-setting-locale-f I did the "Stop forwarding locale from the client" solution and it worked. Best regards, Tiago Chedraoui Silva On Fri, Aug 18, 20

Re: [Bioc-devel] Git transition is happening August 16th.

2017-08-18 Thread Martin Morgan
On 08/16/2017 08:45 PM, Charles Plessy wrote: Le Wed, Aug 16, 2017 at 08:30:22PM +, Turaga, Nitesh a écrit : The Bioconductor git server is now alive!! All future commits to Software and Data experiment packages should be made to the git server. Please see the documentation on how to use

Re: [Bioc-devel] Git transition is happening August 16th.

2017-08-16 Thread Charles Plessy
Le Wed, Aug 16, 2017 at 08:30:22PM +, Turaga, Nitesh a écrit : > > The Bioconductor git server is now alive!! All future commits to Software and > Data experiment packages should be made to the git server. > > Please see the documentation on how to use the new server > https://www.biocondu

Re: [Bioc-devel] Git transition is happening August 16th.

2017-08-16 Thread Turaga, Nitesh
Hi Maintainers, The Bioconductor git server is now alive!! All future commits to Software and Data experiment packages should be made to the git server. Please see the documentation on how to use the new server https://www.bioconductor.org/developers/how-to/git/. If your package has been avai

Re: [Bioc-devel] Git transition is happening August 16th.

2017-08-16 Thread Turaga, Nitesh
Hi Maintainers, It’s August 16th 9am. The SVN commits to the software packages are blocked. There will NOT be any SVN commits now onwards to the software and data-experiment packages. NOTE: Only the workflow packages are still on SVN until further notice about their transition. Best, Nitesh

Re: [Bioc-devel] Git transition is happening August 16th.

2017-08-15 Thread Turaga, Nitesh
Hi Maintainers, We are on schedule. The experiment-data package SVN commits have been disabled. The git transition for these packages is underway now with the latest snapshot. Best, Nitesh > On Aug 7, 2017, at 4:43 PM, Turaga, Nitesh > wrote: > > Hello Maintainers, > > > The details an

Re: [Bioc-devel] Git transition is happening August 16th.

2017-08-14 Thread Turaga, Nitesh
Hi Maintainers, The beta phase for the GIT transition has now come to an end. All access to the git.bioconductor.org server has been suspended till August 16th 6pm EST. Please see the important dates, and times for the transition below. Best, Nitesh > On Aug 7, 2017, at 4:43 PM, Turaga, Ni

Re: [Bioc-devel] Git transition is happening August 16th.

2017-08-08 Thread Ludwig Geistlinger
> - See scenarios on how to commit to the new git server. > (https://github.com/Bioconductor/bioc_git_transition/tree/master/doc) Nitesh, that's a great piece of documentation! Thanks, Ludwig -- Dr. Ludwig Geistlinger CUNY School of Public Health > Hello Maintainers, > > > The details an