Thanks Charles and Taigo, this should be fixed now. If not, can you
re-open and comment on
https://github.com/Bioconductor/bioc_git_transition/issues/34
? Thanks!
Martin
On 08/18/2017 02:36 PM, Tiago Chedraoui Silva wrote:
Any git command sending messages to the git server gave that warning.
/git push upstream master/ is an example.
Tiago Chedraoui Silva
On Fri, Aug 18, 2017 at 9:24 AM, Martin Morgan
<martin.mor...@roswellpark.org <mailto:martin.mor...@roswellpark.org>>
wrote:
On 08/18/2017 12:21 PM, Tiago Chedraoui Silva wrote:
I had the same problem, which is described below:
https://askubuntu.com/questions/144235/locale-variables-have-no-effect-in-remote-shell-perl-warning-setting-locale-f
<https://askubuntu.com/questions/144235/locale-variables-have-no-effect-in-remote-shell-perl-warning-setting-locale-f>
I did the "Stop forwarding locale from the client" solution and
it worked.
yes, but to solve this for other people generally can you tell me
what you did to see the message? git clone
g...@git.bioconductor.org:pacakges/TCGAbiolinks ? git status ? ... ?
Thanks
Best regards,
Tiago Chedraoui Silva
On Fri, Aug 18, 2017 at 8:35 AM, Martin Morgan
<martin.mor...@roswellpark.org
<mailto:martin.mor...@roswellpark.org>
<mailto:martin.mor...@roswellpark.org
<mailto:martin.mor...@roswellpark.org>>> wrote:
On 08/16/2017 08:45 PM, Charles Plessy wrote:
Le Wed, Aug 16, 2017 at 08:30:22PM +0000, Turaga,
Nitesh a écrit :
The Bioconductor git server is now alive!! All future
commits to Software and Data experiment packages
should be
made to the git server.
Please see the documentation on how to use the new
server
https://www.bioconductor.org/developers/how-to/git/
<https://www.bioconductor.org/developers/how-to/git/>
<https://www.bioconductor.org/developers/how-to/git/
<https://www.bioconductor.org/developers/how-to/git/>>.
If your package has been available through SVN
remember to
submit your SSH keys to
https://goo.gl/forms/eg36vcBkIUjfZfLe2
<https://goo.gl/forms/eg36vcBkIUjfZfLe2>
<https://goo.gl/forms/eg36vcBkIUjfZfLe2
<https://goo.gl/forms/eg36vcBkIUjfZfLe2>>.
NOTE: Workflow packages will remain on SVN for the
moment.
Many thanks for this transition !
I have a minor thing to report: when running "git pull"
with a
non-C and non-US
locale, the remote server issues unimportant warning
messages
from perl.
perl: warning: Setting locale failed.
perl: warning: Please check that your locale settings:
LANGUAGE = (unset),
LC_ALL = (unset),
LC_TIME = "en_GB.UTF-8",
LC_MONETARY = "en_GB.UTF-8",
LC_MEASUREMENT = "en_GB.UTF-8",
LC_NUMERIC = "en_GB.UTF-8",
LC_PAPER = "en_GB.UTF-8",
LANG = "en_US.UTF-8"
are supported and installed on your system.
perl: warning: Falling back to a fallback locale
("en_US.UTF-8").
Obviously, client-side LC_ALL=C suppresses this, but
perhaps it
can be silenced
server-side, either by supporting many locales, or
enforcing the
default C
locale without warning.
Hi Charles -- can you clarify a little what you are doing
to get
this response? git clone git... ? or ??
Thanks, Martin
Have a nice day,
Charles
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