Re: [Bioc-devel] New ExperimentHub resource and some related questions

2018-12-23 Thread Martin Morgan
-- Message: 2 Date: Thu, 20 Dec 2018 12:05:57 + From: "Shepherd, Lori" To: "Lu, Dongyi (Lambda)" , "bioc-devel

Re: [Bioc-devel] New ExperimentHub resource and some related questions

2018-12-21 Thread Lu, Dongyi (Lambda)
hbors (Obenchain, Valerie) -- Message: 1 Date: Thu, 20 Dec 2018 12:00:20 + From: Aaron Lun To: bioc-devel Subject: Re: [Bioc-devel] New ExperimentHub resource and some related questions Message-ID: <9bf95433-af04-431b-b71d-62425195

Re: [Bioc-devel] New ExperimentHub resource and some related questions

2018-12-20 Thread Shepherd, Lori
There is a DispatchClass - FilePath - That will download the file and give you the path to the file in the cache location rather than loading it to the R session - You then can use the file path in whatever read/load/etc method you deem fit. RDataClass - I would either say character or mat

Re: [Bioc-devel] New ExperimentHub resource and some related questions

2018-12-20 Thread Aaron Lun
I presume your package is not actually called “SingleCell” (in point 1). This would be pretty confusing wjem compared to the simpleSingleCell package, the SingleCellExperiment package, and the SingleCell biocViews term itself. It would probably make more sense to call it BUStoolsR or some other