Re: [Bioc-devel] tokay1 (windows) build server cannot use the nbconvertR vignette engine

2016-10-07 Thread Hervé Pagès
Hi Philipp, On 10/05/2016 12:09 AM, Angerer, Philipp wrote: Although, since you (Philipp) are the maintainer of the nbconvertR package, you may want to create an INSTALL file in that package. It's up to you. Dan Haha, yeah. Thanks, Dan! I’m already in the process of submittin

Re: [Bioc-devel] tokay1 (windows) build server cannot use the nbconvertR vignette engine

2016-10-05 Thread Angerer, Philipp via Bioc-devel
Although, since you (Philipp) are the maintainer of the nbconvertR package, you may want to create an INSTALL file in that package. It's up to you. Dan Haha, yeah. Thanks, Dan! I’m already in the process of submitting nbconvertR 1.1, which only uses jupyter (Using ipython nbconvert is

Re: [Bioc-devel] tokay1 (windows) build server cannot use the nbconvertR vignette engine

2016-10-04 Thread Dan Tenenbaum
- Original Message - > From: "Hervé Pagès" > To: "Dan Tenenbaum" > Cc: "Philipp Angerer" , "bioc-devel" > > Sent: Tuesday, October 4, 2016 10:16:34 AM > Subject: Re: [Bioc-devel] tokay1 (windows) build server cannot use the &

Re: [Bioc-devel] tokay1 (windows) build server cannot use the nbconvertR vignette engine

2016-10-04 Thread Hervé Pagès
On 10/04/2016 09:56 AM, Dan Tenenbaum wrote: - Original Message - From: "Hervé Pagès" To: "Philipp Angerer" , "bioc-devel" Sent: Tuesday, October 4, 2016 9:23:29 AM Subject: Re: [Bioc-devel] tokay1 (windows) build server cannot use the nbconvertR

Re: [Bioc-devel] tokay1 (windows) build server cannot use the nbconvertR vignette engine

2016-10-04 Thread Dan Tenenbaum
- Original Message - > From: "Hervé Pagès" > To: "Philipp Angerer" , "bioc-devel" > > Sent: Tuesday, October 4, 2016 9:23:29 AM > Subject: Re: [Bioc-devel] tokay1 (windows) build server cannot use the > nbconvertR vignette engine &g

Re: [Bioc-devel] tokay1 (windows) build server cannot use the nbconvertR vignette engine

2016-10-04 Thread Andrzej Oleś
Dear all, linux builders have both IPython 3+ and Jupyter installed, see https://github.com/Bioconductor/BBS-provision-cookbook/blob/master/recipes/default.rb#L256-L264 For consistency, maybe it would make sense to have them both on Windows too. Cheers, Andrzej On Tue, Oct 4, 2016 at 6:23 PM, H

Re: [Bioc-devel] tokay1 (windows) build server cannot use the nbconvertR vignette engine

2016-10-04 Thread Hervé Pagès
Hi Philipp, On 10/04/2016 12:13 AM, Angerer, Philipp via Bioc-devel wrote: Hi, Looking at my package’s build report, the devel version isn’t built anymore on windows: http://bioconductor.org/checkResults/devel/bioc-LATEST/destiny/tokay1-buildsrc.html The release version is built just fine wi

[Bioc-devel] tokay1 (windows) build server cannot use the nbconvertR vignette engine

2016-10-04 Thread Angerer, Philipp via Bioc-devel
Hi, Looking at my package’s build report, the devel version isn’t built anymore on windows: http://bioconductor.org/checkResults/devel/bioc-LATEST/destiny/tokay1-buildsrc.html The release version is built just fine with moscato2: http://bioconductor.org/checkResults/release/bioc-LATEST/dest