Dear all, linux builders have both IPython 3+ and Jupyter installed, see https://github.com/Bioconductor/BBS-provision-cookbook/blob/master/recipes/default.rb#L256-L264
For consistency, maybe it would make sense to have them both on Windows too. Cheers, Andrzej On Tue, Oct 4, 2016 at 6:23 PM, Hervé Pagès <hpa...@fredhutch.org> wrote: > Hi Philipp, > > On 10/04/2016 12:13 AM, Angerer, Philipp via Bioc-devel wrote: > >> Hi, >> >> Looking at my package’s build report, the devel version isn’t built >> anymore on windows: http://bioconductor.org/checkR >> esults/devel/bioc-LATEST/destiny/tokay1-buildsrc.html >> >> The release version is built just fine with moscato2: >> http://bioconductor.org/checkResults/release/bioc-LATEST/ >> destiny/moscato2-buildsrc.html >> >> It would be really nice if this could be fixed. Usually running “jupyter >> nbconvert --help” successfully means that nbconvertR will work. >> > > The error says: > > Either IPython 3+ or Jupyter has to be installed, but neither could > be called. > > But neither Jupyter or IPython 3+ is installed on tokay1 at the moment. > Which one should we install? > > Note that packages with special requirements should list them in the > SystemRequirements field of the DESCRIPTION file. Also it would be great > if you could provide an INSTALL file in the top-level folder of the > package where you explain the installation process of these > requirements. > > Thanks, > H. > > >> Best, Philipp >> >> >> >> >> Helmholtz Zentrum Muenchen >> >> Deutsches Forschungszentrum fuer Gesundheit und Umwelt (GmbH) >> >> Ingolstaedter Landstr. 1 >> >> 85764 Neuherberg >> >> www.helmholtz-muenchen.de >> >> Aufsichtsratsvorsitzende: MinDir'in Baerbel Brumme-Bothe >> >> Geschaeftsfuehrer: Prof. Dr. Guenther Wess, Dr. Alfons Enhsen >> >> Registergericht: Amtsgericht Muenchen HRB 6466 >> >> USt-IdNr: DE 129521671 >> >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> Bioc-devel@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/bioc-devel >> >> > -- > Hervé Pagès > > Program in Computational Biology > Division of Public Health Sciences > Fred Hutchinson Cancer Research Center > 1100 Fairview Ave. N, M1-B514 > P.O. Box 19024 > Seattle, WA 98109-1024 > > E-mail: hpa...@fredhutch.org > Phone: (206) 667-5791 > Fax: (206) 667-1319 > > > _______________________________________________ > Bioc-devel@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/bioc-devel > [[alternative HTML version deleted]] _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
