Re: [Bioc-devel] error message upon installing easyRNASeq PLUS OTHER QUESTION

2012-11-14 Thread Richard Friedman
On Nov 14, 2012, at 5:18 PM, Steve Lianoglou wrote: > = > I think Simon's server recently had a run in with a bad HD and lots of > link are dead -- it seems RSwitch is broken there. > > I zipped RSwitch.app and put it here: > http://cbio.mskcc.org/~lianos/files/bioc/RSwitch.app.zip > > So you c

Re: [Bioc-devel] error message upon installing easyRNASeq PLUS OTHER QUESTION

2012-11-14 Thread Steve Lianoglou
Hi, On Wed, Nov 14, 2012 at 5:14 PM, Dan Tenenbaum wrote: > On Wed, Nov 14, 2012 at 2:03 PM, Richard Friedman > wrote: >> Steve, >> >> Rswitch is no longer on the server. > > I'm not sure where you're looking for Rswitch but it's here: > http://r.research.att.com/ I think Simon's server

Re: [Bioc-devel] error message upon installing easyRNASeq PLUS OTHER QUESTION

2012-11-14 Thread Dan Tenenbaum
On Wed, Nov 14, 2012 at 2:14 PM, Dan Tenenbaum wrote: > On Wed, Nov 14, 2012 at 2:03 PM, Richard Friedman > wrote: >> Steve, >> >> Rswitch is no longer on the server. > > I'm not sure where you're looking for Rswitch but it's here: > http://r.research.att.com/ > Whoops, you're right that

Re: [Bioc-devel] error message upon installing easyRNASeq PLUS OTHER QUESTION

2012-11-14 Thread Dan Tenenbaum
On Wed, Nov 14, 2012 at 2:03 PM, Richard Friedman wrote: > Steve, > > Rswitch is no longer on the server. I'm not sure where you're looking for Rswitch but it's here: http://r.research.att.com/ > I will try renaming the app and reload R15.2. If you are suggesting renaming R.app, I don'

Re: [Bioc-devel] error message upon installing easyRNASeq PLUS OTHER QUESTION

2012-11-14 Thread Richard Friedman
Steve, Rswitch is no longer on the server. I will try renaming the app and reload R15.2. In the meantime I am installing new packages in the development version so I can get things done. Thanks and best wishes, Rich On Nov 14, 2012, at 4:52 PM, Steve Lianoglou wrote: > Hi, > > On Wed

Re: [Bioc-devel] error message upon installing easyRNASeq PLUS OTHER QUESTION

2012-11-14 Thread Steve Lianoglou
Hi, On Wed, Nov 14, 2012 at 1:13 PM, Richard Friedman wrote: [snip] > I am keeping 2.16 and 2.15 separate as far as libraries go. > However the RGUI boots with 2.16. Is there a way that I can switch back and > forth > to get it to Boot with 2.15? > When I click on the R terminals in 2.15 and 2.16

Re: [Bioc-devel] error message upon installing easyRNASeq PLUS OTHER QUESTION

2012-11-14 Thread Richard Friedman
On Nov 13, 2012, at 7:02 PM, Steve Lianoglou wrote: > Hi Richard, > > Not that this really helps you, but I just installed R-devel from > r.research.att.com, and: > > = > R> source("http://bioconductor.org/biocLite.R";) > R> useDevel(TRUE) > Error: 'devel' version already in use ## great