On Nov 13, 2012, at 7:02 PM, Steve Lianoglou wrote:
> Hi Richard,
>
> Not that this really helps you, but I just installed R-devel from
> r.research.att.com, and:
>
> =====
> R> source("http://bioconductor.org/biocLite.R";)
> R> useDevel(TRUE)
> Error: 'devel' version already in use ## great
> R> biocLite("easyRNASeq")
> ...
> ... download muchos packages
>
> R> library(easyRNASeq)
> ... this works...
> ====
>
Steve,
It works for me also.
##############################################################################
> biocLite("easyRNASeq")
Error: could not find function "biocLite"
Bioconductor version 2.12 (BiocInstaller 1.9.4), ?biocLite for help
starting httpd help server ... done
> biocLite("easyRNASeq")
BioC_mirror: http://bioconductor.org
Using Bioconductor version 2.12 (BiocInstaller 1.9.4), R version 2.16.0.
Installing package(s) 'easyRNASeq'
trying URL
'http://bioconductor.org/packages/2.12/bioc/bin/macosx/leopard/contrib/2.16/easyRNASeq_1.5.1.tgz'
Content type 'application/x-gzip' length 638451 bytes (623 Kb)
opened URL
==================================================
downloaded 623 Kb
The downloaded binary packages are in
/var/folders/9d/pv_lg9dx2s53pqh37v5ln0xs5pvd_d/T//RtmpxWFrfO/downloaded_packages
##############################################################################
Thank you very much!
I am keeping 2.16 and 2.15 separate as far as libraries go.
However the RGUI boots with 2.16. Is there a way that I can switch back and
forth
to get it to Boot with 2.15?
When I click on the R terminals in 2.15 and 2.16 I get windows but I really
like the GUI.
Best wishes,
Rich
Richard A. Friedman, PhD
Associate Research Scientist,
Biomedical Informatics Shared Resource
Herbert Irving Comprehensive Cancer Center (HICCC)
Lecturer,
Department of Biomedical Informatics (DBMI)
Educational Coordinator,
Center for Computational Biology and Bioinformatics (C2B2)/
National Center for Multiscale Analysis of Genomic Networks (MAGNet)
Room 824
Irving Cancer Research Center
Columbia University
1130 St. Nicholas Ave
New York, NY 10032
(212)851-4765 (voice)
fried...@cancercenter.columbia.edu
http://cancercenter.columbia.edu/~friedman/
In memoriam, Ray Bradbury
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