Re: [Bioc-devel] check error in SeqVarTools

2019-05-01 Thread Shepherd, Lori
rk 14263 From: Stephanie Gogarten Sent: Tuesday, April 30, 2019 2:54:44 PM To: Pages, Herve Cc: bioc-devel@r-project.org; Shepherd, Lori Subject: Re: [Bioc-devel] check error in SeqVarTools If a user gave that exact set of random numbers as input, then a missing value would be the correc

Re: [Bioc-devel] check error in SeqVarTools

2019-04-30 Thread Stephanie Gogarten
gt; > > > Roswell Park Cancer Institute > > > > Department of Biostatistics & Bioinformatics > > > > Elm & Carlton Streets > > > > Buffalo, New York 14263 > > > > ________ > > From: Bioc-devel on behalf o

Re: [Bioc-devel] check error in SeqVarTools

2019-04-30 Thread Pages, Herve
on behalf of Stephanie > Gogarten > Sent: Monday, April 29, 2019 4:41:30 PM > To: bioc-devel@r-project.org > Subject: [Bioc-devel] check error in SeqVarTools > > Hi, > > I see that SeqVarTools has an error in check on malbec2, after passing > checks for a week with no chang

Re: [Bioc-devel] check error in SeqVarTools

2019-04-30 Thread Shepherd, Lori
Elm & Carlton Streets Buffalo, New York 14263 From: Bioc-devel on behalf of Stephanie Gogarten Sent: Monday, April 29, 2019 4:41:30 PM To: bioc-devel@r-project.org Subject: [Bioc-devel] check error in SeqVarTools Hi, I see that SeqVarTools has an error in

[Bioc-devel] check error in SeqVarTools

2019-04-29 Thread Stephanie Gogarten
Hi, I see that SeqVarTools has an error in check on malbec2, after passing checks for a week with no changes to the code. This is a result of a unit test which generates random numbers; once in a while a particular set of random numbers ends up generating a missing value in a calculation which cau