How are you generating random numbers? How is the generation ending up with a
missing number? This seems like it might be an edge case that should be caught
in your code?
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
________________________________
From: Bioc-devel <bioc-devel-boun...@r-project.org> on behalf of Stephanie
Gogarten <sdmor...@uw.edu>
Sent: Monday, April 29, 2019 4:41:30 PM
To: bioc-devel@r-project.org
Subject: [Bioc-devel] check error in SeqVarTools
Hi,
I see that SeqVarTools has an error in check on malbec2, after passing
checks for a week with no changes to the code. This is a result of a unit
test which generates random numbers; once in a while a particular set of
random numbers ends up generating a missing value in a calculation which
causes the unit test to fail. This particular failure is very poorly timed
since it happens to be the date of the deadline for packages to pass
checks. I fully expect tomorrow's build to pass again, so I hope
SeqVarTools can remain in the release.
thanks,
Stephanie
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