Re: [Bioc-devel] Testing the srnadiff package with R CMD check takes lots of time

2024-12-19 Thread Matthias Zytnicki
unexpected but lucky side-effect? Thanks again, Matthias. From: Vincent Carey Sent: Thursday, December 19, 2024 5:13:17 PM To: Matthias Zytnicki Cc: bioc-devel@r-project.org Subject: Re: [Bioc-devel] Testing the srnadiff package with R CMD check takes lots

Re: [Bioc-devel] Testing the srnadiff package with R CMD check takes lots of time

2024-12-19 Thread Vincent Carey
I tried running your tests (checked out from github repo at commit e580d52d7242693b79ec6b8483d68a65d6fb9e02 (HEAD -> master, origin/master, origin/HEAD) Author: Matthias Zytnicki Date: Mon Mar 6 21:35:41 2023 +0100 version bump and ran into some serious issues -- a very long stream of >

[Bioc-devel] Testing the srnadiff package with R CMD check takes lots of time

2024-12-02 Thread Matthias Zytnicki
Dear everyone, I have difficulties trying to decrease the time spent to check my package, srnadiff (for reproducibility, you can get the GitHub repo from https://github.com/mzytnicki/srnadiff, on the devel branch). I tried to reduce the tests to 2 files (for reproducibility: test_annotation.R