Re: [Bioc-devel] How to update annotation packages

2016-09-16 Thread Obenchain, Valerie
Hi Jo, If you make the updated packages available via drop box and I can post them for you. Thanks for pointing out that we don't have web documentation on how to update annotations - I'll add some. Valerie On 09/16/2016 01:14 AM, Rainer Johannes wrote: > Dear all, > > I wanted to update the En

[Bioc-devel] How to update annotation packages

2016-09-16 Thread Rainer Johannes
Dear all, I wanted to update the EnsDb.* annotation packages I originally provided, but I didn't find any guide how to do that in the "Developer resources" on the Bioconductor website (although it could well be that I overlooked it). How can I update my annotation packages? thanks, jo

Re: [Bioc-devel] How to update annotation packages

2014-10-16 Thread Marc Carlson
Hi Robert, I am sending you another invite now. Marc On 10/16/2014 08:59 AM, Valerie Obenchain wrote: Hi Robert, Annotation packages are generally updated before each release. You should have received an email from Marc (cc'd) last month asking if you had any updates. Updated packages are

Re: [Bioc-devel] How to update annotation packages

2014-10-16 Thread Valerie Obenchain
Hi Robert, Annotation packages are generally updated before each release. You should have received an email from Marc (cc'd) last month asking if you had any updates. Updated packages are uploaded to our ftp server and Marc adds them to the repository. If you need to make a change I think Ma

[Bioc-devel] How to update annotation packages

2014-10-15 Thread Robert Castelo
Hi, i submitted one release ago the following annotation packages: MafDb.ALL.wgs.phase1.release.v3.20101123 MafDb.ESP6500SI.V2.SSA137.dbSNP138 phastCons100way.UCSC.hg19 for which i'm also the "maintainer". while the functionality to access their annotation resides in another software