Hi Robert,
Annotation packages are generally updated before each release. You
should have received an email from Marc (cc'd) last month asking if you
had any updates. Updated packages are uploaded to our ftp server and
Marc adds them to the repository.
If you need to make a change I think Marc needs to give you access to
the server or maybe you already have it. He'll be able to fill in the
details.
Valerie
On 10/15/2014 09:08 AM, Robert Castelo wrote:
Hi,
i submitted one release ago the following annotation packages:
MafDb.ALL.wgs.phase1.release.v3.20101123
MafDb.ESP6500SI.V2.SSA137.dbSNP138
phastCons100way.UCSC.hg19
for which i'm also the "maintainer".
while the functionality to access their annotation resides in another
software package i maintain (VariantFiltering), they contain some
functionality to help updating their annotations themselves. i need to
update those R scripts which are part of the annotation packages,
however, i found nowhere whether this is possible via svn.
how should i proceed with this, should i made the changes local and
submit the new version, or is there some 'svn' way to do it just like
with software or experiment data packages?
thanks,
robert.
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