Re: [Bioc-devel] Diverging version numbering on Bioconductor RELEASE

2023-12-20 Thread migdal migdal
Thanks again Steffen and Mike for sharing, recently I found some free time and ended up implementing your suggestions as a GitHub Action. Maybe this could be of interest to you https://github.com/Genentech/midasHLA/issues/27#issuecomment-1855795946 Cheers Maciek On Thu, 16 Nov 2023 at 11:08, Mike

Re: [Bioc-devel] Diverging version numbering on Bioconductor RELEASE

2023-11-16 Thread Mike Smith
Personally I do as Steffen mentioned, and grab the upstream changes manually. Changes not introduced by me only happen once every 6 months, and I'm involved enough with Bioconductor that I generally know when the release and version bump has occurred, so it's never quite felt like enough work to i

Re: [Bioc-devel] Diverging version numbering on Bioconductor RELEASE

2023-11-15 Thread migdal migdal
Awesome, thanks for the response! I think it should be possible to put what you are doing manually into GithubActions script, but I am not sure how to do that. On Wed, Nov 15, 2023, 12:12 Neumann, Steffen wrote: > Hi, > > so far I am doing this manually, I have my github as remote origin, > and

Re: [Bioc-devel] Diverging version numbering on Bioconductor RELEASE

2023-11-15 Thread Neumann, Steffen
Hi, so far I am doing this manually, I have my github as remote origin, and the bioc git as upstream, and indeed after the releases I pull from upstream the changed version number and push it to my origin on github. Yours, Steffen On Sat, 2023-11-11 at 09:35 +0100, migdal migdal wrote: > Hi guys

[Bioc-devel] Diverging version numbering on Bioconductor RELEASE

2023-11-11 Thread migdal migdal
Hi guys, recently I have realized that the version number in one of my packages does not match with the version in the bioconductor repository ( https://github.com/Genentech/midasHLA/issues/27). The reason is that, while I have been doing no changes past the last few releases a version bump was ha