Re: [Bioc-devel] Aliasing `]` breaks BiocCheck::BiocCheck() version 1.18.0

2018-12-22 Thread Martin Morgan
of it - >>>> >>>> https://github.com/Bioconductor/BiocCheck/issues >> >> >>>> >>>> >>>> Lori Shepherd >>>> >>>> Bioconductor Core Team >

Re: [Bioc-devel] Aliasing `]` breaks BiocCheck::BiocCheck() version 1.18.0

2018-12-22 Thread Tierney, Luke
Shepherd, Lori >> wrote: >>>> >>>> Can you please open an issue for this so we don't lose track of it - >>>> >>>> https://github.com/Bioconductor/BiocCheck/issues >>>> >>>> >>>&g

Re: [Bioc-devel] Aliasing `]` breaks BiocCheck::BiocCheck() version 1.18.0

2018-12-20 Thread Tierney, Luke
>>> Lori Shepherd >>> > >> Bioconductor Core Team > >> >>> Roswell Park Cancer Institute >>> >>> Department of Biostatistics & Bioinformatics >>> >>> Elm & Carlton Streets

Re: [Bioc-devel] Aliasing `]` breaks BiocCheck::BiocCheck() version 1.18.0

2018-12-20 Thread Martin Morgan
> >> Roswell Park Cancer Institute >> >> Department of Biostatistics & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> >> ____ >> From: Bioc-devel on beh

Re: [Bioc-devel] Aliasing `]` breaks BiocCheck::BiocCheck() version 1.18.0

2018-12-19 Thread Tierney, Luke
conductor Core Team >> >> Roswell Park Cancer Institute >> >> Department of Biostatistics & Bioinformatics >> >> Elm & Carlton Streets >> >> Buffalo, New York 14263 >> >> ________ >> From: Bioc-devel on behalf of S

Re: [Bioc-devel] Aliasing `]` breaks BiocCheck::BiocCheck() version 1.18.0

2018-12-18 Thread Tierney, Luke
devel on behalf of Shian Su > > Sent: Monday, December 17, 2018 8:34:10 PM > To: bioc-devel > Subject: [Bioc-devel] Aliasing `]` breaks BiocCheck::BiocCheck() version > 1.18.0 > > Hi all, > > If you put > > foo <- `[` > > Somewhere in a package,

Re: [Bioc-devel] Aliasing `]` breaks BiocCheck::BiocCheck() version 1.18.0

2018-12-18 Thread Shepherd, Lori
ew York 14263 From: Bioc-devel on behalf of Shian Su Sent: Monday, December 17, 2018 8:34:10 PM To: bioc-devel Subject: [Bioc-devel] Aliasing `]` breaks BiocCheck::BiocCheck() version 1.18.0 Hi all, If you put foo <- `[` Somewhere in a package, it will t

[Bioc-devel] Aliasing `]` breaks BiocCheck::BiocCheck() version 1.18.0

2018-12-17 Thread Shian Su
Hi all, If you put foo <- `[` Somewhere in a package, it will trigger Error in makeUsageCollector(fun, ...) : only works for closures In BiocCheck::BiocCheck() (version 1.18.0). This comes from if (typeof(fun) != "closure") stop("only works for closures") In codetools::makeUsageColle