Re: [Bioc-devel] Bioconductor git-svn bridge is available

2014-05-23 Thread Ilari Scheinin
I’m also having issues with my bridges. It seems that they always “die" after the initial sync (which for me is always a Git win). After awhile when I commit again to GitHub, nothing happens on the SVN, and I end up deleting the bridges and re-creating them. This always does the trick, but when

Re: [Bioc-devel] git-svn bridge: Track devel and release in different branches of same repo

2014-05-15 Thread Ilari Scheinin
> Are there plans for the awesome git-svn bridge to allow the tracking of devel > and releases in different branches of the same git repository? Currently, one > has to create different repos for devel and release (see > http://bioconductor.org/developers/how-to/git-svn/). I agree that the poss

[Bioc-devel] Cytogenetic bands

2014-03-22 Thread Ilari Scheinin
Hi, I would like to obtain the boundaries of cytogenetic bands for human (hg19) as I need to map arbitrary genomic positions to the band containing them. I figured these would be available via the Homo.sapiens annotation package, so I took a look at the available keytypes. MAP looked promising: