Re: [Bioc-devel] GenomicFiles: some random issues

2014-09-29 Thread Charles Berry
Michael Lawrence gene.com> writes: > > This comes down to an inheritance vs. composition decision, but I hope > everyone is aware of the extraColumnSlots mechanism in GRanges that makes > it easy to add additional "column-shaped" slots to a subclass of GRanges. Where is it documented, please?

Re: [Bioc-devel] org-mode vignettes

2013-08-28 Thread Charles Berry
Wolfgang Huber embl.de> writes: > > > Hi > > is there already a best practice (example?) for how to deliver vignettes written in org-mode > (http://orgmode.org) in Bioconductor packages? > > (This would also require that emacs and its ESS and org modes are installed on the build servers.) W