Hi,
I received an email notifying me that my package BUMHMM is failing on the
Linux platforms with the following error:
" Error in loadNamespace [...] : there is no package called ‘usethis’ "
As far as I can see, `usethis` is a suggested package for `testthat`, which
BUMHMM uses for tests and li
Sorry, looks like the error got mangled. I pasted it in this gist:
https://gist.github.com/alinaselega/f5c4f724309211cc4a5bedd2a05bfd1e
Thanks,
Alina
On Sun, 6 Sep 2020 at 12:36, Alina Selega wrote:
> Hi,
>
> I wanted to re-add a license file to my repository which got misplaced (no
Hi,
I wanted to re-add a license file to my repository which got misplaced (no
changes to code). I followed the instructions in this link (
https://bioconductor.org/developers/how-to/git/pull-upstream-changes/) to
pull upstream changes.
I then followed these instructions (
https://bioconductor.or
k() in the latest RStudio on a Windows 10 machine.
I also noticed that the latest build report from RELEASE_3_8 is not
including the Windows server so I don't know if the warning shows up there
too. Do you have any advice?
Thanks,
Alina
On Fri, 12 Apr 2019 at 12:29, Alina Selega wrote:
> Oka
tp://bioconductor.org/developers/how-to/git/
>
>
>
>
>
> Lori Shepherd
>
> Bioconductor Core Team
>
> Roswell Park Cancer Institute
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
> ---
gt;
>
> Lori Shepherd
>
> Bioconductor Core Team
>
> Roswell Park Cancer Institute
>
> Department of Biostatistics & Bioinformatics
>
> Elm & Carlton Streets
>
> Buffalo, New York 14263
> --
> *From:* Bioc-devel on behalf of Alina
On Thu, 11 Apr 2019 at 12:47, Alina Selega wrote:
> Hi,
>
> I have made some minor updates to my package (BUMHMM) yesterday to fix the
> warnings arising on the Windows server and pushed the changes with a
> version bump from its current version 1.6.1. (actually, two bumps.)
>
Hi,
My package BUMHMM fails to build on tokay2 with the following error
message:
" there is no package called 'Biobase' ".
http://bioconductor.org/checkResults/3.5/bioc-LATEST/
BUMHMM/tokay2-buildsrc.html
There are no problems with other platforms.
It seems that many packages are encountering t
## I am resending this email as I it got rejected from posting due to "a
message with identical text being posted to the list recently" (for reasons
unknown to me). ##
Hi,
My package BUMHMM is giving an error when building on tokay2, with the
error message: "there is no package called 'Biobase'".
Hi,
My package BUMHMM is failing to build on tokay2, with the error: "there is
no package called 'Biobase'". The package is built and checked with no
problems on other platforms.
The build report is here:
http://bioconductor.org/checkResults/3.5/bioc-LATEST/BUMHMM/tokay2-buildsrc.html
This seems
a citation is automatically generated.
>> So yes, effectively it would overwrite. See details in R-exts.
>>
>> On Wed, Mar 22, 2017 at 6:30 AM, Alina Selega
>> wrote:
>>
>> > Hi Monther,
>> >
>> > Thank you for your reply!
>> >
&g
person("Michael", "Wilson"),
>
> person("Matthew", "Ritchie")),
>
> journal = "Bioinformatics",
>
> page = "414-424",
>
> volume = 33,
>
> number =
vignette, but it
would be nice to also have it on the main page.)
Thank you,
Alina Selega
[[alternative HTML version deleted]]
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