Re: [Bioc-devel] DataFrame: replacement error

2019-04-01 Thread Michael Lawrence via Bioc-devel
Thanks for the report. It should be fixed in S4Vectors 0.21.22. On Mon, Apr 1, 2019 at 12:01 PM Ludwig Geistlinger < ludwig.geistlin...@sph.cuny.edu> wrote: > I have a SummarizedExperiment with putatively user-annoted rowData. > I have a function that does computation on this SE and appends > the

[Bioc-devel] DataFrame: replacement error

2019-04-01 Thread Ludwig Geistlinger
I have a SummarizedExperiment with putatively user-annoted rowData. I have a function that does computation on this SE and appends the results to the rowData. When (repeatedly) called on the SE, the function just overwrites / replaces already existing columns. In R release and S4Vectors_0.20.1 >

[Bioc-devel] Deadline for devel branch 3.9 to pass R CMD build and R CMD check

2019-04-01 Thread Shepherd, Lori
The deadline for all packages (software, data experiment, workflows) to pass R CMD build and R CMD check without TIMEOUT, ERROR, or WARNING is Friday April 26th. The devel branch will temporarily be frozen on Sunday April 28th to branch for the April 30th release. Any changes after the freeze wi

[Bioc-devel] Deadline for commits to current Release 3.8 Branch

2019-04-01 Thread Shepherd, Lori
The deadline for commits to the current release 3.8 branch is Monday April 15th. At this time the release 3.8 branch will be frozen and no longer accept any commits. If your package is having TIMEOUT, ERROR, or WARNINGS - it will forever be frozen in this state. This is in preparation for the Tu