Dear Bioc-team,
We would like to add a maintainer (CC-ed) for the the package “singscore”.
GitHub username: bhuvad
Please confirm when he gets access to the bioconductor git repositories.
Many thanks
Ruqian
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The Rsubread package has a .BBSoptions file to warn the Bioconductor package
management routines that Rsubread is not available for Windows.
R CMD check doesn't know about the .BBSoptions tag and therefore issues a NOTE
whenever the package is checked. Can I add an .Rbuildignore file to tell R C
We always check newly submitted packages against the latest or devel branch of
Bioconductor as this will be the suite of packages that it needs to be
compatible with for dependencies. Depending on the time of year that branch is
either the latest release version of R or R devel. We are curren
You can submit and we will probably make an exception if you can show it is
already referenced in papers - what we would recommend is submitting with say
2.99.z as you describe so that at the next release we bump it to 3.0.0 making
a new x version to indicate Bioconductor inclusion.
Cheers,
This is probably a better post on the support site so the broader community
could answer.
https://support.bioconductor.org/
Lori Shepherd
Bioconductor Core Team
Roswell Park Cancer Institute
Department of Biostatistics & Bioinformatics
Elm & Carlton Streets
Buffalo, New York 14263
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Hello Bioc,
I am running some tests to compare trimLRpatterns vs other trimming
tools (skewer, cutadapt, AdapterRemoval).
I have generated simulated data using ART
(https://www.niehs.nih.gov/research/resources/software/biostatistics/art/index.cfm).
In particular, there is a modified version of th
Dear all,
I have an R package which I want to submit to Bioconductor. The package is
on GitHub and is in version 2.y.z. Is it possible to not start at version
1.0.0 (or 0.99.z) when submitting the package, but rather from 3.0.0 (or
2.99.z). Restarting the versions would be confusing for those alre
Aaron points in the right direction with generating random number streams in
the serial part of the program, then sending these to the workers in a
consistent way. Use ?nextRNGStream to generate the streams for each replicate,
and .Random.seed on the thread. Probably this generates a BiocCheck w
Hello,
I created a package and submitted it to Bioconductor but I have a build
error.
Bioconductor 3.9 requires R version 3.6 and for the moment I only have
version 3.5.2 on my computer.
In the vignette of my package I use AnnotationHub 3.8 to load one fasta
file and one gtf file.
I have no error
