Re: [Bioc-devel] Bioconductor git server beta testing begins now.

2017-07-09 Thread Diego Diez
Dear all, Great to know that the git transition is moving forward. I tested cloning (https) several packages and I noticed a significant difference in the repository size between svn and git. Two examples showing the output (svn/git) of du -k: Biobase: 4968 / 8720 limma: 6284 / 20296 Looking bri

Re: [Bioc-devel] Error in cmd check, possibly because examples areexecuted in wrong order

2017-07-09 Thread Arman Sh
Thank you very much for your response. The last time, you recommended that instead of storing data in environment, use BiocFileCache package to store the function outputs. There are 5 functions that work together. For convenience, I call them A, B, C, D, and E. C depends on A and B, while D