Re: [Bioc-devel] VariantAnnotation::isDelins() ??

2015-02-11 Thread Valerie Obenchain
Thanks Robert! It's been added to 1.13.29. Valerie On 02/11/2015 02:36 AM, Robert Castelo wrote: sure, i'm attaching the patch created from a fresh checkout of the trunk this morning. in principle, all required bits are there and it builds and checks without errors and warnings. cheers, rober

Re: [Bioc-devel] function name clash between TFBSTools and graphics

2015-02-11 Thread Martin Morgan
On 02/11/2015 05:52 AM, Elena Grassi wrote: Hello, I've just submitted a package and I'm trying to address the last issues thanks to the automated building system (if it's inappropriate to ask here before hearing from the reviewer please ignore this mail and excuse me!). I am still getting BUIL

[Bioc-devel] function name clash between TFBSTools and graphics

2015-02-11 Thread Elena Grassi
Hello, I've just submitted a package and I'm trying to address the last issues thanks to the automated building system (if it's inappropriate to ask here before hearing from the reviewer please ignore this mail and excuse me!). I am still getting BUILD BIN warnings: http://bioconductor.org/spb_re

Re: [Bioc-devel] VariantAnnotation::isDelins() ??

2015-02-11 Thread Robert Castelo
sure, i'm attaching the patch created from a fresh checkout of the trunk this morning. in principle, all required bits are there and it builds and checks without errors and warnings. cheers, robert. On 02/10/2015 07:37 PM, Valerie Obenchain wrote: Hi Robert, This sounds like a good addition