Hello, I've just submitted a package and I'm trying to address the last issues thanks to the automated building system (if it's inappropriate to ask here before hearing from the reviewer please ignore this mail and excuse me!).
I am still getting BUILD BIN warnings: http://bioconductor.org/spb_reports/MatrixRider_0.99.2_buildreport_20150211025737.html >From what I can see the problem is: " Warning: replacing previous import by 'graphics::plot' when loading 'seqLogo' " I'm doing: importFrom(TFBSTools, PFMatrix, PFMatrixList) in my NAMESPACE. I've also tried with importClassesFrom(TFBSTools, PFMatrix, PFMatrixList) with the same results (at least on my BUILD bin, I'm sorry to have submitted the package before solving this issue but I did not know that it would have issued a build WARNING). As long as seqLogo is a method available for PFMatrix I don't know how to solve the issue. graphics is brought in by...? I think that the original seqLogo method by the seqLogo package is imported by TFBSTools itself. (I'm also wondering why in the daily build system for TFBSTools the warning appears but it is not listed as WARNINGS: is it a difference in the reporting system or I am completely off the scent of the real issue here? :) ) Thank you very much, E. -- $ pom _______________________________________________ Bioc-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/bioc-devel
