Hello!
Our jobs can ask for dedicated per-node disk space, e.g. "--gres=tmp:1G",
where an ephemeral directory is managed by the site prolog/epilog and
usage is capped using an xfs project quota. This works well, although we
really need to look at job_container/tmpfs.
I note that slurm alread
Hi there,
I was wondering if anyone knew what the expected lifetime of 2.15.x might
be, please?
With LTS releases being tied to a RHEL major version, having some idea of
this would help plan server installs/upgrades.
Thanks!
Mark
___
lustre-discu
Hi Jason,
Thanks, that's a big help!
Best,
Mark
On Wed, 11 Sep 2024, jason-alpine-i...@shalott.net wrote:
[You don't often get email from jason-alpine-i...@shalott.net. Learn why this
is important at https://aka.ms/LearnAboutSenderIdentification ]
[EXTERNAL EMAIL]
I'd like to take a loo
Public bug reported:
I'm following the instructions at:
https://mutschler.dev/linux/ubuntu-btrfs-20-04/#create-filesystems-for-root-and-efi-system-partitions.
All goes well until I attempt to work with the installer ("ubiquity
--no-bootloader" command).
I can select language (English), keyboard
Hi all,
We find that our bacula catalog database can handle more concurrent backup
jobs than it can verify catalog jobs. We'd therefore like to have a lower
concurrency limit for verify catalog jobs, but I cannot see an obvious way
to do this.
One way would be to run two director/catalog pai
uld be a simple way to reconcile or regenerate what quota has
recorded vs what is actually on disk, which I have verified two different
ways.
--
Dan
On Wed, 2023-10-04 at 15:01 +0100, Mark Dixon wrote:
Hi Dan,
I think it gets corrected when you umount and fsck the OST's themselves
(not lfsck)
Hi Dan,
I think it gets corrected when you umount and fsck the OST's themselves
(not lfsck). At least I recall seeing such messages when fsck'ing on 2.12.
Best,
Mark
On Wed, 4 Oct 2023, Daniel Szkola via lustre-discuss wrote:
[EXTERNAL EMAIL]
No combination of lfsck runs has helped with t
Hi Christopher,
Not an exact match, but we've seen problems running Vasp on a 2.15.x
client against 2.12.6 servers. It can get in quite a tangle, to the point
that other clients cannot "ls -l" the Vasp working directory.
Don't know (yet) if it's also true of 2.12.9.
Best,
Mark
On Fri, 23 J
On Fri, 16 Dec 2022, Justin Pryzby wrote:
...
That limitation isn't due to shorewall but rather networking in general.
You can't know and certainly couldn't trust the username from a remote
system (like "identd"), and loopback has the same limitation.
Any ideas on how to handle this in shorewal
Hi all,
I'm having a play with shorewall rules, specifically using the USER column
to restrict access to a local port. If I have a rule like this...
DROP:info fw fw tcp 1332 - - - !foo - - - - - -
...then only local user foo can connect to 1332/tcp on the server's normal
IP address. Howeve
[
https://issues.apache.org/jira/browse/DIRSERVER-2371?page=com.atlassian.jira.plugin.system.issuetabpanels:comment-tabpanel&focusedCommentId=17640055#comment-17640055
]
Mark Dixon commented on DIRSERVER-2371:
---
{color:#172b4d}I think I'm s
In addition to the other suggestions, there's this:
https://slurm.schedmd.com/faq.html#tmpfs_jobcontainer
https://slurm.schedmd.com/job_container.conf.html
I would be interested in hearing how well it works - it's so buried in the
documentation that unfortunately I didn't see it until after I r
On Thu, 5 May 2022, Legato, John (NIH/NHLBI) [E] wrote:
...
We are in the process of upgrading from Slurm 21.08.6 to Slurm
21.08.8-2. We’ve upgraded the controller and a few partitions worth of
nodes. We notice the nodes are losing contact with the controller but
slurmd is still up. We thought
On Thu, 5 May 2022, Ole Holm Nielsen wrote:
...
You're right, probably the correct order for Configless must be:
* stop slurmctld
* edit slurm.conf etc.
* start slurmctld
* restart the slurmd nodes to pick up new slurm.conf
See also slides 29-34 in
https://slurm.schedmd.com/SLUG21/Field_Notes_5
On Thu, 5 May 2022, Ole Holm Nielsen wrote:
...
That is correct. Just do "scontrol reconfig" on the slurmctld server. If
all your slurmd's are truly running Configless[1], they will pick up the
new config and reconfigure without restarting.
Details are summarized in
https://wiki.fysik.dtu.dk/n
We're on a more recent version of bacula, but we reload our config quite
frequently and have never needed to restart bacula-dir to get it to work.
Best wishes,
Mark
On Wed, 2 Feb 2022, Shaligram Bhagat, Yateen (Nokia - IN/Bangalore) wrote:
[EXTERNAL EMAIL]
Hi all,
In the Bacula 9.4.4 main r
On Fri, 17 Dec 2021, Phil Stracchino wrote:
...
I've been running my Bacula jobs in parallel for literally decades now
and have never seen it result in a duplicate Path or Filename warning.
And they ARE only warnings.
I would not worry about it as long as it is only a warning. You could
manuall
Hi all,
I find the verify job feature of bacula really useful to see what has
changed since the last verifyinit job, but the job output is becoming
difficult to read as it's clustered with lots and lots of messages of the
form:
17-Dec 18:28 foo-dir JobId 67663: Warning: sql_get.c:186 More th
Hi all,
Sorry for the noise, this was down to a problem with our configless setup.
Really must start running slurmd everywhere and get rid of the
compute-only version of slurm.conf...
Cheers,
Mark
On Mon, 13 Dec 2021, Mark Dixon wrote:
[EXTERNAL EMAIL]
Hi all,
Just wondering if anyone
Hi all,
Just wondering if anyone else had seen this.
Running slurm 21.08.2, we're seeing srun work normally if it is able to
run immediately. However, if there is a delay in job start, for example
after a wait for another job to end, srun fails. e.g.
[test@foo ~]$ srun -p test --pty bash
On Wed, 17 Nov 2021, Bjørn-Helge Mevik wrote:
...
We are using basically the same setup, and have not found any other way
than running "scontrol show job ..." in the prolog (even though it is
not recommended). I have yet to see any problems arising from it, but
YMMW.
If you find a different way
Hi everyone,
I'd like to configure slurm such that users can request an amount of disk
space for TMPDIR... and for that request to be reserved and quota'd via
commands like "sbatch --gres tmp:10G jobscript.sh". Probably reinventing
someone's wheel, but I'm almost there.
I have:
- created a
rly UCNS)
-----Original Message-
From: slurm-users On Behalf Of Mark
Dixon
Sent: Wednesday, November 10, 2021 10:14
To: slurm-users@lists.schedmd.com
Subject: [slurm-users] enable_configless, srun and DNS vs. hosts file
[EXTERNAL SENDER - PROCEED CAUTIOUSLY]
Hi,
I'm using the "
Hi,
I'm using the "enable_configless" mode to avoid the need for a shared
slurm.conf file, and am having similar trouble to others when running
"srun", e.g.
srun: error: fwd_tree_thread: can't find address for host cn120, check
slurm.conf
srun: error: Task launch for StepId=113.0 failed
UTC+1 dhei...@opentext.com wrote:
> Am Donnerstag, dem 02.09.2021 um 08:46 -0700 schrieb Mark Dixon:
>
> I'd like to do a simple merge lookup of an array within a hiera yaml file.
> At the moment I seem to be getting the array from the hiera location that
> "wins",
Hi there,
I'd like to do a simple merge lookup of an array within a hiera yaml file.
At the moment I seem to be getting the array from the hiera location that
"wins", and not a merged version.
I guess it's not possible, perhaps due to possible circular dependencies,
etc. Is that right, please
a poor connection - try squeezing the cable tightly into the
side of the radio and maybe even holding it in while attempting the
upload again (being careful not to squeeze PTT at the same time).
Cheers, Mark Dixon
On 7/06/2021 11:01 am, Gerald Stein wrote:
> I’m new to Chirp software.
ay to
continue the job while still 'fixing' the issue. That could be done in
the TaskEpilog script (assuming your daemon user has permissions to do so).
On 5/24/2021 8:56 AM, Mark Dixon wrote:
Hi Brian,
Thanks for replying. On our hardware, GPUs allocated to a job by
cgroup sometimes
ittle more.
On 5/24/2021 3:02 AM, Mark Dixon wrote:
Hi all,
Sometimes our compute nodes get into a failed state which we can only
detect from inside the job environment.
I can see that TaskProlog / TaskEpilog allows us to run our detection
test; however, unlike Epilog and Prolog, they do n
Hi all,
Sometimes our compute nodes get into a failed state which we can only
detect from inside the job environment.
I can see that TaskProlog / TaskEpilog allows us to run our detection
test; however, unlike Epilog and Prolog, they do not drain a node if they
exit with a non-zero exit code
gents.
>
> You need the module on the agent if you want to run puppet apply only.
>
> Hth,
> Martin
>
>
> On 18. Mar 2021, at 17:47, Mark Dixon wrote:
>
> Thanks for that, it's showing just how weird things are getting!
>
> puppet 7.4.1, puppetserver 7.0
M UTC Martin Alfke wrote:
> Hi Mark,
>
> You can check if a type is available by running puppet describe -l
> This will print out all available puppet custom types.
>
> Best,
> Martin
>
>
> On 11. Mar 2021, at 18:11, Mark Dixon wrote:
>
> Hi Martin,
>
>
please check module path using 'puppet config print modulepath' and
> install the required core modules into one of the mentioned folders:
> puppet module install puppetlabs-mount_core --target-dir
>
> This should make the mount resource type available.
>
> Best,
> Marti
Hi there,
Following on from the conversation about the availability of a puppet agent
RPM on el8 for the ppc64le architecture, I'm trying to use agent in the
version of puppet made available as a ruby gem.
It largely works just by doing this, giving me puppet 7.4.1:
yum install ruby
gem i
/puppet/el/8/
http://yum.puppetlabs.com/puppet6/el/8/
http://yum.puppetlabs.com/puppet7/el/8/
Best,
Mark
On Tuesday, March 2, 2021 at 6:40:43 PM UTC Justin Stoller wrote:
> On Tue, Mar 2, 2021 at 9:05 AM Mark Dixon wrote:
>
>> Hi Nick,
>>
>> That's great news, for
Hi Nick,
That's great news, for a moment there I was worried :)
It's a new deployment so I'm fairly relaxed about puppet 6 vs. 7, but
specifically I'm feeling the lack of any version at all for rhel8.
Best wishes,
Mark
On Tuesday, March 2, 2021 at 4:48:21 PM UTC Nick Walker wrote:
> Hi Mark,
Hi all,
Just been looking at yum.puppetlabs.com for a copy of the puppet agent for
the ppc64le architecture on rhel8 and couldn't find one. I can see a rhel7
version of puppet6 (but not puppet7) and nothing at all for rhel8.
Has open source puppet dropped support for IBM POWER9 clients, please?
I think this has been asked before, in March 2019, but I'm wondering if
there is any further news on Chirp support for the Yaesu FT-991A? Is
there perhaps a different model which uses much the same communication
protocol that does have Chirp support?
Kind regards, Mark Dixon,
even with a basic after-market cable.
Kind regards, Mark Dixon, VK6EZ.
On 6/01/2021 2:06 am, Billy Joe Higginbotham Jr via chirp_users wrote:
> I can’t get my radio to link with my computer. I have the uv-5r and run
> Windows 7 on my computer. I keep get the message (An error has occurred
Hi Mark,
Thanks so much for this - yes, applying that pull request against ompi
4.0.5 allows hdf5 1.10.7's parallel tests to pass on our Lustre
filesystem.
I'll certainly be applying it on our local clusters!
Best wishes,
Mark
On Tue, 1 Dec 2020, Mark Allen via users wrote:
At least for t
On Fri, 27 Nov 2020, Dave Love wrote:
...
It's less dramatic in the case I ran, but there's clearly something
badly wrong which needs profiling. It's probably useful to know how
many ranks that's with, and whether it's the default striping. (I
assume with default ompio fs parameters.)
Hi Da
-Original Message-
From: users On Behalf Of Mark Dixon via users
Sent: Thursday, November 26, 2020 9:38 AM
To: Dave Love via users
Cc: Mark Dixon ; Dave Love
Subject: Re: [OMPI users] MPI-IO on Lustre - OMPIO or ROMIO?
On Wed, 25 Nov 2020, Dave Love via users wrote:
The perf test says romio
On Wed, 25 Nov 2020, Dave Love via users wrote:
The perf test says romio performs a bit better. Also -- from overall
time -- it's faster on IMB-IO (which I haven't looked at in detail, and
ran with suboptimal striping).
I take that back. I can't reproduce a significant difference for total
I
Hi Edgar,
Pity, that would have been nice! But thanks for looking.
Checking through the ompi github issues, I now realise I logged exactly
the same issue over a year ago (completely forgot - I've moved jobs since
then), including a script to reproduce the issue on a Lustre system.
Unfortunate
There was a bug fix in the Open
MPI to ROMIO integration layer sometime in the 4.0 series that fixed a
datatype problem, which caused some problems in the HDF5 tests. You
might be hitting that problem.
Thanks
Edgar
-Original Message-
From: users On Behalf Of Mark Dixon via users
Sent: Monday, N
Hi all,
I'm confused about how openmpi supports mpi-io on Lustre these days, and
am hoping that someone can help.
Back in the openmpi 2.0.0 release notes, it said that OMPIO is the default
MPI-IO implementation on everything apart from Lustre, where ROMIO is
used. Those release notes are pre
Hi Martin,
Thanks for the reply, glad to know that it's not just me. They're
InitCatalog Verify jobs. Going to SQL feels a bit hairy, as we'd have to
be careful to cascade the delete to at least the File and Log tables.
As prune (unfortunately) only lets you work on a single client at a time,
Hi all,
I use bacula to backup my data, but also find verify jobs to be extremely
useful.
However, after checking my bacula database, I noticed that none of the old
verify jobs have been pruned, which is making the catalog quite big.
Actual backup jobs are happily being automatically pruned.
d for it, but both sets of hardware was busy.
In this case, I think I can safely move back to scaling down the partition
charge :)
Cheers,
Mark
--
Mark Dixon Tel: +44(0)191 33 41383
Advanced Research Computing (ARC), Durham University, UK
On Thu, 17 Sep 2020, Paul Edmon wrote:
So the way we handle it is that we give a blanket fairshare to everyone but
then dial in our TRES charge back on a per partition basis based on
hardware. Our fairshare doc has a fuller explanation:
https://docs.rc.fas.harvard.edu/kb/fairshare/
-Paul Ed
d managing users, particularly
as I've not figured out how to define a group of users in one place (say,
a unix group) that I can then use multiple times.
Is there a better way, please?
Thanks,
Mark
--
Mark Dixon Tel: +44(0)191 33 41383
Advanced Research Computing (ARC), Durham University, UK
On Wed, 16 Sep 2020, Niels Carl W. Hansen wrote:
If you explicitely specify the account, f.ex. 'sbatch -A myaccount'
then 'slurm.log_info("submit -- account %s", job_desc.account)'
works.
Great, thanks - that's working!
Of course I have other problems... :
On Wed, 16 Sep 2020, Diego Zuccato wrote:
...
From the source it seems these fields are available:
account
comment
direct_set_prio
gres
job_id Always nil ? Maybe no JobID yet?
job_state
licenses
max_cpus
max_nodes
min_
Hi all,
I'm trying to get started with the lua job_submit feature and I have a
really dumb question. This job_submit Lua script:
function slurm_job_submit( job_desc, part_list, submit_uid )
slurm.log_info("submit called lua plugin")
for k,v in pairs(job_desc) do
slurm.log_
Hi Josh,
Many thanks for your advice, good points all - I'll continue to play.
Best wishes,
Mark
On Tue, 28 Apr 2020, Josh Fisher wrote:
...
Yes. I believe the client is multi-threaded in that multiple commands can be
issued and they will each be handled in a separately spawned thread. Howeve
p from
the client.
On Mon, Apr 27, 2020 at 9:34 AM Mark Dixon
wrote:
Hi all,
Am I right in thinking that a single bacula job can only back up each file
in its fileset sequentially - there's no multithreading available to back
up multiple files at the same time in order to leverage the clie
Hi all,
Am I right in thinking that a single bacula job can only back up each file
in its fileset sequentially - there's no multithreading available to back
up multiple files at the same time in order to leverage the client CPU?
I'm a relatively long-term user of bacula (thanks!) who has been
efault qos for foo's jobs:
"sacctmgr modify user foo set qos=drain defaultqos=drain"
And then update the qos on all of foo's waiting jobs.
I'll be using David's GrpSubmitJobs=0 suggestion instead.
Thanks for everyone's help,
Mark
On Wed, 1 Apr 2020, Mark Dixon
un to completion and pending jobs won't start
Antony
On Wed, 1 Apr 2020 at 10:57, Mark Dixon wrote:
Hi all,
I'm a slurm newbie who has inherited a working slurm 16.05.10 cluster.
I'd like to stop user foo from submitting new jobs but allow their
existing jobs to run.
We hav
done wrong.
Best,
Mark
On Wed, 1 Apr 2020, mercan wrote:
Hi;
If you have working job_submit.lua script, you can put a block new jobs of
the spesific user:
if job_desc.user_name == "baduser" then
return 2045
end
thats all!
Regards;
Ahmet M.
1.04.2020 16:22 tarih
we set the
GrpSubmit jobs on an account to 0 which allowed in-flight jobs to continue
but no new work to be submitted.
HTH,
David
On Wed, Apr 1, 2020 at 5:57 AM Mark Dixon wrote:
Hi all,
I'm a slurm newbie who has inherited a working slurm 16.05.10 cluster.
I'd like to stop user foo
Hi all,
I'm a slurm newbie who has inherited a working slurm 16.05.10 cluster.
I'd like to stop user foo from submitting new jobs but allow their
existing jobs to run.
We have several partitions, each with its own qos and MaxSubmitJobs
typically set to some vaue. These qos are stopping a "sa
Hi all,
I've hung up my cape - giving up my superpowers on the University of Leeds
supercomputers - and before I went, had a bit of fun looking at our gridengine
accounting logs. Thought I'd share it, in case anyone found it interesting:
https://arc.leeds.ac.uk/very-nearly-almost-14-years-of-a-
Hi all,
I've hung up my cape - giving up my superpowers on the University of Leeds
supercomputers - and before I went, had a bit of fun looking at our gridengine
accounting logs. Thought I'd share it, in case anyone found it interesting:
https://arc.leeds.ac.uk/very-nearly-almost-14-years-of-a-
Hi,
I’ve built parallel HDF5 1.8.21 against OpenMPI 4.0.1 on CentOS 7 and a
Lustre 2.12 filesystem using the OS-provided GCC 4.8.5 and am trying to
run the testsuite. I’m failing the testphdf5 test: could anyone help,
please?
I’ve successfully used the same method to pass tests when building H
On Fri, 8 Mar 2019, Reuti wrote:
...
> We got access to a SLURM equipped cluster where one always get complete
> nodes and are asked to avoid single serial jobs or to pack them by
> scripting to fill the nodes. With the additional need for a workflow
> application (kinda DRMAA) and array job dep
On Fri, 8 Mar 2019, Reuti wrote:
...
> We got access to a SLURM equipped cluster where one always get complete
> nodes and are asked to avoid single serial jobs or to pack them by
> scripting to fill the nodes. With the additional need for a workflow
> application (kinda DRMAA) and array job dep
Hi Fritz,
That's one step closer to my dream of being able to pay for a commercially
maintained (bugfixes, features, etc.), open source version of gridengine.
So near and yet so far!
The best of luck :)
Mark
On Fri, 1 Mar 2019, Friedrich Ferstl wrote:
> Hi,
>
> I hope people do not take offe
e was more than one
>> issue with Sharetree and arrays that we saw but it didn’t happen in the
>> default sharetree configuration. I will have to check.
>>
>> Regards
>>
>> Bill
>>
>> Sent from my iPhone
>>
>>> On Feb 28, 2019, at 4:32 AM,
Hi Bill,
I fixed that share-tree-array-jobs priority problem some time ago, unless
you're thinking of a different one?
https://arc.liv.ac.uk/trac/SGE/ticket/435
https://arc.liv.ac.uk/trac/SGE/changeset/4840/sge
We use share tree and array jobs all the time with no problems. It made it
into a S
On Thu, 6 Dec 2018, Reuti wrote:
...
> One can create persistent scratch directories e.g. in a job prolog (just
> make the list of nodes unique and issue `qrsh -inherit ...` for each
> nodes `mkdir $TMPDIR-persistent` Curley braces are optional here, as the
> dash can't be a character in an envi
Hi,
I thought I'd share some difficulties I've had upgrading from 11 to 12.
* Java 1.8 seems unstable - I've been doing a bit of Scala dev today, and
the JVM seems somewhat unstable. SBT is crashing with the following fairly
regularly. I'm pretty sure I've rebuilt it since the upgrade.
#
# A fat
On Mon, 29 Oct 2018 at 13:24, Lars Engels wrote:
> On Mon, Oct 29, 2018 at 07:59:32AM +0000, Mark Dixon wrote:
> > Same, FreeBSD update doesn't seem to be working:
> >
> > $ sudo freebsd-update upgrade -r 12.0-BETA2
>
> IIRC freebsd-update only works for RCs, not
Same, FreeBSD update doesn't seem to be working:
$ sudo freebsd-update upgrade -r 12.0-BETA2
Mark
___
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To unsubscribe, send any mail to "freebsd-stable-uns
On Fri, 31 Aug 2018, Daniel Povey wrote:
...
This gets back to the issue of who is going to maintain GridEngine.
Dave Love briefly resurfaced (enough to dissuade me from forming a
group to maintain it, we were going to make this its home
https://github.com/son-of-gridengine/sge) but seems to have
Does that mean the public git repository (and anything else?) has also
moved?
$ git clone git://git.hpdd.intel.com/fs/lustre-release.git
Cloning into 'lustre-release'...
fatal: remote error: access denied or repository not exported:
/fs/lustre-release.git
Tried replacing hpdd.intel.com w
projects from queues' configuration.
Ilya.
On Wed, Jun 6, 2018 at 2:41 AM, Mark Dixon wrote:
On Tue, 5 Jun 2018, Ilya M wrote:
...
Is there a way to submit AR when there are projects attached to queues? I
am using SGE 6.2u5.
...
Hi Ilya,
I've run into this, too: I'm afraid that
On Tue, 5 Jun 2018, Ilya M wrote:
...
Is there a way to submit AR when there are projects attached to queues?
I am using SGE 6.2u5.
...
Hi Ilya,
I've run into this, too: I'm afraid that there isn't. I logged it here:
https://arc.liv.ac.uk/trac/SGE/ticket/1466
I started to fix it but ran out
Hi Daniel,
Well done on wanting to work on gridengine, it's really good to see people
interested.
Although the topmost layers have clearly suffered from years of applying
patches on top of patches on top of patches and so are in sore need of a
bit of refactoring, there are some really nice b
On Tue, 17 Apr 2018, Joshua Baker-LePain wrote:
As an alternative to fixing our current setup, I'd be most interested to
hear if/how other folks are handling GPUs in their SoGE setups. I was
considering changing the slot count in gpu.q to match the number of GPUs
in a host (rather than CPU core
On Mon, 16 Apr 2018, William Hay wrote:
...
I don't think that can be right given that the qmaster complains about
multiple user files on start up. If it gave up after the first then
presumably it wouldn't complain about the others.
All I know is that, when we had this sort of problem, most o
Hi William,
I've seen this before back in the SGE 6.2u5 days when it used to write out
core binding options it couldn't subsequently read back in.
IIRC, users are read from disk at startup in turn and then the files are
only written to from then on - so this sort of thing only tends to be
no
Hi Jakub,
That's right: if you need to cut down the logging, one option is to add
the redirection in the start script.
You're looking for the line starting "sge_qmaster", and you might want to
try adding a ">/dev/null" after it. You'll lose all syslog messages from
sge_qmaster though (normal
Hi,
It's this bit that's doing it: "SGE_ND=true". It's there so that the
qmaster doesn't daemonise, in order to play nicely with systemd.
Unfortunately, as it was originally put in to aid debugging, it also
enables some debug messages.
If too much is being generated, I'd suggest either redir
d of
> noto>0:x11-fonts/noto
> as it does now, and rebuilt it (which should work [tm]).
>
>
>
> mfg Tobias
>
>> On 6 March 2018 at 09:13, Mark Dixon wrote:
>> Hi all,
>>
>> Chrome seems to have added a dependency on x11-fonts/noto which seems
Hi all,
Chrome seems to have added a dependency on x11-fonts/noto which seems to be
conflicting with KDE's x11-fonts/noto-lite.
Is there anything we can do about this? Not sure if depending on the full
800Mb noto is a great move on their part.
Mark
t]
could not find endpoint with port: 1, lid: 69, msg_type: 100
On Thu, 19 Oct 2017, Mark Dixon wrote:
Thanks Ralph, will do.
Cheers,
Mark
On Wed, 18 Oct 2017, r...@open-mpi.org wrote:
Put “oob=tcp” in your default MCA param file
On Oct 18, 2017, at 9:00 AM, Mark Dixon wrote:
Hi,
We&
lation are probably also going to affect which compiler implementation
works fastest for you.
Mark
On Thu, 26 Oct 2017 17:10 Mark Dixon wrote:
Hi Mark,
Many thanks for the reply.
Am I going against the flow by using the Intel compiler with GROMACS? I've
been using it so far because of -
d the fact that gcc passes fine suggests
you should be confident in the code and icc.
Mark
On Thu, 26 Oct 2017 13:56 Mark Dixon wrote:
Hi there,
Is there a recommended compiler for GROMACS, please?
I'm trying to validate my install on a CentOS 7.4 Intel Broadwell system
by running the
Hi there,
Is there a recommended compiler for GROMACS, please?
I'm trying to validate my install on a CentOS 7.4 Intel Broadwell system
by running the tests shipped in the GROMACS source tar ball (and the
separate regression tests).
If I use GCC (4.8.5 or 7.2.0), everything passes but, if I
Thanks Ralph, will do.
Cheers,
Mark
On Wed, 18 Oct 2017, r...@open-mpi.org wrote:
Put “oob=tcp” in your default MCA param file
On Oct 18, 2017, at 9:00 AM, Mark Dixon wrote:
Hi,
We're intermittently seeing messages (below) about failing to register memory
with openmpi 2.0.2 on ce
Hi,
We're intermittently seeing messages (below) about failing to register
memory with openmpi 2.0.2 on centos7 / Mellanox FDR Connect-X 3 and the
vanilla IB stack as shipped by centos.
We're not using any mlx4_core module tweaks at the moment. On earlier
machines we used to set registered m
ly include
> "simple" subfolders of ~, but it fails when trying to index the whole ~.
>
>
> mfg Tobias
>
>
>> On 11 August 2017 at 11:10, Mark Dixon wrote:
>> I've stopped in now, would have to set it going again. CPU is not the issue
>&g
retically :D
>
> mfg Tobias
>
>> On 10 August 2017 at 22:12, Mark Dixon wrote:
>> Hi all,
>>
>> I'm having problems with Baloo again. I'm not sure exactly what the
>> requirements are for it, but I must be doing something wrong. It essentially
&
Hi all,
I'm having problems with Baloo again. I'm not sure exactly what the
requirements are for it, but I must be doing something wrong. It
essentially renders the system unusable.
I finally caught it in this state - CPU is minimal, and memory isn't too
bad (for this box) - baloo_file was using
I did a freebsd-update to RC2 yesterday evening. On rebooting with the new
kernel, my zfs mounts were not present.
In single user mode, the zfs command was core dumping. Fix was to copy
/boot/kernel.old to /boot/kernel
Backtrace is not super useful I think:
lldb) bt
* thread #1, name = 'zfs',
On Tue, 27 Jun 2017, juanesteban.jime...@mdc-berlin.de wrote:
Never mind. One of my users submitted a job with 139k subjobs.
...
Hi,
I don't think I have all the messages from this thread for some reason. No
doubt I'm going to repeat things someone else has suggested - apologies in
advance
>
> When starting a KDE session - and wow, it starts very fast - I see
> backgoundpicture and panel.
>
> But a few secconds later kwin crashes, restarts, crashes, restarts and
> so on, and then I get the offer to change to openbox because of this
> crashs.
>
>
Yes, I get exactly the same here, also
Hi,
I'm playing with plasma5 from github, but kwin crashes pretty much
immediately. I managed to produce this backtrace:
[mark@markspc /usr/home/mark]$ lldb /usr/local/bin/kwin_x11 -c
kwin_x11.core
(lldb) target create "/usr/local/bin/kwin_x11" --core "kwin_x11.core"
Core file '/usr/home/mark/kwi
ould that affect area51? They still want an
> up-to-date KDE...
>
> Cheers,
> DMK
> tcberner at freebsd.org
> On May 20, 2017 7:04 AM, Mark Dixon wrote:
> > I suspect area51 svn isn't coming back. PC-BSD is a defunct project,
> > they've all moved on t
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