patch proposal for bug 588278 in sofa-framework
Hi, I just sent a patch for the sofa-framework issue #588278. It seems to work on my side. I did not updated SVN as I am not the maintainer of the software and it seems that Andreas is working on package (as per a previous email). Olivier -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/4efc2c27.4050...@laposte.net
Re: patch proposal for bug 588278 in sofa-framework
On Thu, Dec 29, 2011 at 10:00:23AM +0100, olivier.sallou wrote: > I just sent a patch for the sofa-framework issue #588278. Cool, thanks. > It seems to work on my side. > > I did not updated SVN as I am not the maintainer of the software and it > seems that Andreas is working on package (as per a previous email). You can easily become maintainer by just adding your name to Uploaders. :-) The only reason whe I started working on sofa-framework is that nobody else would do it otherwise. Dominique told me he stopped using it and currently has not much time to spend for this package. So you can always feel free to directly commit to SVN. Kind regards and in any case thanks for the patch Andreas. -- http://fam-tille.de -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20111229093034.gd27...@an3as.eu
Re: Sofa-framework: Again QT help needed
Hi Eric, On Thu, Dec 29, 2011 at 07:33:33AM +0100, Eric MAEKER wrote: > > There is obviosely some trouble in the Qt3 compatibility layer. > > Hi Andreas, > > I've took a **very quick** look at the code. I believe that > > sofa-1.0-rc1/applications/projects/Modeler/exec/exec.pro > > is missing the Qt3 layer declaration. > > Try to add > > QT *= qt3support while this sounded promising it did not changed the build log. Kind regards Andreas. -- http://fam-tille.de -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/20111229163153.gb26...@an3as.eu
Re: patch proposal for bug 588278 in sofa-framework
Le 12/29/11 10:30 AM, Andreas Tille a écrit : > On Thu, Dec 29, 2011 at 10:00:23AM +0100, olivier.sallou wrote: >> I just sent a patch for the sofa-framework issue #588278. > Cool, thanks. > >> It seems to work on my side. >> >> I did not updated SVN as I am not the maintainer of the software and it >> seems that Andreas is working on package (as per a previous email). > You can easily become maintainer by just adding your name to Uploaders. > :-) The only reason whe I started working on sofa-framework is that > nobody else would do it otherwise. Dominique told me he stopped using > it and currently has not much time to spend for this package. So you > can always feel free to directly commit to SVN. I had a look at SVN in latest version (the one you are working on), and file and completly different. My patch does not apply to v1.0~rc1 I gonna have a look for this release Maybe it works fine directly. > > Kind regards and in any case thanks for the patch > > Andreas. > -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (pgp.mit.edu) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438 -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/4efc9cf9.1090...@irisa.fr
Re: patch proposal for bug 588278 in sofa-framework
Le 12/29/11 10:30 AM, Andreas Tille a écrit : > On Thu, Dec 29, 2011 at 10:00:23AM +0100, olivier.sallou wrote: >> I just sent a patch for the sofa-framework issue #588278. > Cool, thanks. > >> It seems to work on my side. >> >> I did not updated SVN as I am not the maintainer of the software and it >> seems that Andreas is working on package (as per a previous email). > You can easily become maintainer by just adding your name to Uploaders. > :-) The only reason whe I started working on sofa-framework is that > nobody else would do it otherwise. Dominique told me he stopped using > it and currently has not much time to spend for this package. So you > can always feel free to directly commit to SVN. I am not a Sofa user, so I'm not the best one to maintain it. I just tried to help at closing bugs > Kind regards and in any case thanks for the patch > > Andreas. > -- Olivier Sallou IRISA / University of Rennes 1 Campus de Beaulieu, 35000 RENNES - FRANCE Tel: 02.99.84.71.95 gpg key id: 4096R/326D8438 (pgp.mit.edu) Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438 -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/4efc4160.4060...@irisa.fr
Cufflinks package fails to build on Launchpad PPA
Hi, As a way of getting familiar with git-buildpackage and company. I have been trying to clone several packages git repository and getting them onto the PPA. I was able to do so for samtools, only for Oneiric as I feel safer staying out of Lucid LTS until I gain more experience. I created a new branch and tag on the samtools git repository to show the source of the package. Trying now to do the same for cufflinks, but the build if failing: https://launchpadlibrarian.net/88726220/buildlog_ubuntu-oneiric-amd64.cufflinks_1.2.1-1~oneiric1_FAILEDTOBUILD.txt.gz I think I can see the problem, on that log I see the package is been build without the patches, so the BAM header files aren't been found: dh_quilt_unpatch Removing patch 0003-fix_includes_path.patch Restoring src/hits.h Removing patch 0002-bam2samtools.patch Restoring ax_bam.m4 Removing patch 0001-fix_spelling.patch Restoring src/locfit/arith.c Restoring src/locfit/lfd.c No patches applied dh_clean make[1]: Leaving directory `/build/buildd/cufflinks-1.2.1' debian/rules build dh build --with autoreconf dh_testdir dh_autoreconf ... ... checking for bamlib... configure: error: We could not detect the bam libraries (version or higher). If you have a staged bam library (still not installed) please specify $BAM_ROOT in your environment and do not give a PATH to --with-bam option. If you are sure you have bam installed, then check your version number looking in . See http://randspringer.de/bam for more documentation. In my local environment using cowbuilder, the patches are applied: dh_quilt_unpatch Removing patch 0003-fix_includes_path.patch Restoring src/hits.h Removing patch 0002-bam2samtools.patch Restoring ax_bam.m4 Removing patch 0001-fix_spelling.patch Restoring src/locfit/lfd.c Restoring src/locfit/arith.c No patches applied dh_clean make[1]: Leaving directory `/tmp/buildd/cufflinks-1.2.1' dpkg-source -b cufflinks-1.2.1 dpkg-source: info: using source format `3.0 (quilt)' dpkg-source: warning: patches have not been applied, applying them now (use --no-preparation to override) dpkg-source: info: applying 0001-fix_spelling.patch dpkg-source: info: applying 0002-bam2samtools.patch dpkg-source: info: applying 0003-fix_includes_path.patch dpkg-source: info: building cufflinks using existing ./cufflinks_1.2.1.orig.tar.gz dpkg-source: info: building cufflinks in cufflinks_1.2.1-1~oneiric1.debian.tar.gz dpkg-source: info: building cufflinks in cufflinks_1.2.1-1~oneiric1.dsc debian/rules build dh build --with autoreconf dh_testdir dh_autoreconf ... ... checking for bamlib... yes Is there a reason why is this happening? Thanks, Carlos -- To UNSUBSCRIBE, email to debian-med-requ...@lists.debian.org with a subject of "unsubscribe". Trouble? Contact listmas...@lists.debian.org Archive: http://lists.debian.org/CABgGhB+EiQefCwXwihoyLyCHg=325orrx9kvyfoskfyk9yz...@mail.gmail.com
Re: your mail
Hi Yaroslav,
Indeed, I misunderestimated build-depends, now corrected. Strange
that debuild did not complain about unsatisfied build dependencies,
contrary to what `debuild --help` says ("option -D enabled by
default"). After passing -D explicitly to debuild, I was able to sort
this one out.
Humbly asking to give it one last try before the NY, grab it here:
https://sourceforge.net/projects/aghermann/files/deb/amd64/
(johnhommer.com seems to have a glitch or whatever at the moment).
Cheers,
Andrei
On 28 December 2011 01:19, Yaroslav Halchenko wrote:
> Hi Andrei,
>
> damn holidays keep us away from all the fun!... before reply in full --
> regarding build-depends -- did you try/build in a clean
> environment (e.g. using pbuilder or cowbuilder?) if not -- give it a
> shout and then adjust build-depends accordingly ;)
>
> here is my protocol of 'struggle':
> http://www.onerussian.com/tmp/aghermann_0.4.3.3-1_amd64.build
>
> Cheers
>
> On Sun, 25 Dec 2011, andrei zavada wrote:
>
>> Hi Yaroslav,
>
>> Sorry for taking a week to respond. There was not a single day last
>> week I could have a contiguous space of one hour to address the
>> issues.
> --
> =--=
> Keep in touch www.onerussian.com
> Yaroslav Halchenko www.ohloh.net/accounts/yarikoptic
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Re: your mail
On Fri, 30 Dec 2011, andrei zavada wrote:
> Indeed, I misunderestimated build-depends, now corrected. Strange
> that debuild did not complain about unsatisfied build dependencies,
> contrary to what `debuild --help` says ("option -D enabled by
> default"). After passing -D explicitly to debuild, I was able to sort
> this one out.
;-) you just misunderstood the meaning of -D -- it checks that those
build-depends listed in your Build-Depends are present on the system
where you are trying to build. in your case you pretty much didn't have
any build-depends specified (e.g. boost libs etc)
> Humbly asking to give it one last try before the NY, grab it here:
> https://sourceforge.net/projects/aghermann/files/deb/amd64/
> (johnhommer.com seems to have a glitch or whatever at the moment).
oh no... please no sf with it mad set of redirects etc... I would be
grateful if you just verify that you can "dget http://URL_TO.dsc"; and
get all needed sources to build
in this case you also forgotten .orig.tar.gz for 0.4.3.4 so I can't even
try to build
also quickly looked at debian/copyright
you need to list src/libexstropm/exstrom.hh copyright holder/license
since you derived from their work (if I got it right)
> Cheers,
> Andrei
--
=--=
Keep in touch www.onerussian.com
Yaroslav Halchenko www.ohloh.net/accounts/yarikoptic
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