msafiri wrote:
> Hello everyone,
>
> I'm using SAGE to analyze the brain's vasculature. The vessel network
> is stored as a networkX graph and I would like to plot this graph from
> the SAGE command line (or notebook) using Paraview (http://
> www.paraview.org).
> I use OS X Leopard and I have the latest versions of both SAGE and
> Paraview, versions 3.2.3 and 3.4.0 respectively.
>
> What I have tried so far:
> Both the sage folder and paraview.app reside in /Applications
> From the SAGE command line set PYTHONPATH:
> sage: sys.path.append('/Applications/paraview.app/Contents/MacOS')
> sage: sys.path.append('/Applications/paraview.app/Contents/Resources/
> paraview)
> In bash .profile set DYLD_LIBRARY_PATH to /Applications/paraview.app/
> Contents/MacOS
> sage: import servermanager as sm
> fails with a fatal error, presumably because SAGE and Paraview use
> different versions of python.
>
> Has anyone successfully made the two softwares work together and can
> give me some hints?
> Any help is greatly appreciated,
> Johannes
A first step could be to install paraview3 in the sage environment.
You need cmake, so eventually install the experimental cmake-2.4.8.spkg:
./sage -i cmake-2.4.8.spkg
then do a ./sage -sh
and follow the instructions on
http://paraview.org/Wiki/ParaView:Build_And_Install
to build and install paraview within Sage.
Can't check this because I don't have a mac.
Jaap
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